ncsw_data.source.reaction.miscellaneous.utility.formatting

The ncsw_data.source.reaction.miscellaneous.utility package formatting module.

Classes

MiscellaneousReactionDataSourceFormattingUtility

The miscellaneous chemical reaction data source formatting utility class.

Module Contents

class ncsw_data.source.reaction.miscellaneous.utility.formatting.MiscellaneousReactionDataSourceFormattingUtility

The miscellaneous chemical reaction data source formatting utility class.

static format_v_20131008_kraut_h_et_al(input_directory_path: str | os.PathLike[str], output_directory_path: str | os.PathLike[str]) → None

Format the data from the v_20131008_kraut_h_et_al version of the data source.

Parameters:

• input_directory_path – The path to the input directory where the data is extracted.

• output_directory_path – The path to the output directory where the data should be formatted.

static format_v_20161014_wei_j_n_et_al(input_directory_path: str | os.PathLike[str], output_directory_path: str | os.PathLike[str]) → None

Format the data from the v_20161014_wei_j_n_et_al version of the data source.

Parameters:

• input_directory_path – The path to the input directory where the data is extracted.

• output_directory_path – The path to the output directory where the data should be formatted.

static format_v_20200508_grambow_c_et_al(version: str, input_directory_path: str | os.PathLike[str], output_directory_path: str | os.PathLike[str]) → None

Format the data from a v_*_20200508_grambow_c_et_al version of the data source.

Parameters:

• version – The version of the data source.

• input_directory_path – The path to the input directory where the data is extracted.

• output_directory_path – The path to the output directory where the data should be formatted.

static format_v_golden_dataset_by_20211102_lin_a_et_al(input_directory_path: str | os.PathLike[str], output_directory_path: str | os.PathLike[str]) → None

Format the data from the v_golden_dataset_by_20211102_lin_a_et_al version of the data source.

Parameters:

• input_directory_path – The path to the input directory where the data is extracted.

• output_directory_path – The path to the output directory where the data should be formatted.

static format_v_rdb7_by_20220718_spiekermann_k_et_al(input_directory_path: str | os.PathLike[str], output_directory_path: str | os.PathLike[str]) → None

Format the data from the v_rdb7_by_20220718_spiekermann_k_et_al version of the data source.

Parameters:

• input_directory_path – The path to the input directory where the data is extracted.

• output_directory_path – The path to the output directory where the data should be formatted.

static format_v_orderly(version: str, input_directory_path: str | os.PathLike[str], output_directory_path: str | os.PathLike[str]) → None

Format the data from a v_orderly_* version of the database.

Parameters:

• version – The version of the chemical reaction database.

• input_directory_path – The path to the input directory where the data is extracted.

• output_directory_path – The path to the output directory where the data should be formatted.