Index

_

__repr__() (ncsw_data.storage.cacs.sqlite_db.model.base.CaCSSQLiteDatabaseModelReprMethodMixin method) (ncsw_data.storage.cacs.sqlite_db.model.base.mixin.CaCSSQLiteDatabaseModelReprMethodMixin method) __table_args__ (ncsw_data.storage.cacs.sqlite_db.model.archive.CaCSSQLiteDatabaseModelArchiveSource attribute) (ncsw_data.storage.cacs.sqlite_db.model.archive.source.CaCSSQLiteDatabaseModelArchiveSource attribute) __tablename__ (ncsw_data.storage.cacs.sqlite_db.model.archive.CaCSSQLiteDatabaseModelArchiveCompound attribute) (ncsw_data.storage.cacs.sqlite_db.model.archive.CaCSSQLiteDatabaseModelArchiveCompoundPattern attribute) (ncsw_data.storage.cacs.sqlite_db.model.archive.CaCSSQLiteDatabaseModelArchiveCompoundPatternSource attribute) (ncsw_data.storage.cacs.sqlite_db.model.archive.CaCSSQLiteDatabaseModelArchiveCompoundSource attribute) (ncsw_data.storage.cacs.sqlite_db.model.archive.CaCSSQLiteDatabaseModelArchiveReaction attribute) (ncsw_data.storage.cacs.sqlite_db.model.archive.CaCSSQLiteDatabaseModelArchiveReactionPattern attribute) (ncsw_data.storage.cacs.sqlite_db.model.archive.CaCSSQLiteDatabaseModelArchiveReactionPatternSource attribute) (ncsw_data.storage.cacs.sqlite_db.model.archive.CaCSSQLiteDatabaseModelArchiveReactionSource attribute) (ncsw_data.storage.cacs.sqlite_db.model.archive.CaCSSQLiteDatabaseModelArchiveSource attribute) (ncsw_data.storage.cacs.sqlite_db.model.archive.compound.CaCSSQLiteDatabaseModelArchiveCompound attribute) (ncsw_data.storage.cacs.sqlite_db.model.archive.compound_pattern.CaCSSQLiteDatabaseModelArchiveCompoundPattern attribute) (ncsw_data.storage.cacs.sqlite_db.model.archive.compound_pattern_source.CaCSSQLiteDatabaseModelArchiveCompoundPatternSource attribute) (ncsw_data.storage.cacs.sqlite_db.model.archive.compound_source.CaCSSQLiteDatabaseModelArchiveCompoundSource attribute) (ncsw_data.storage.cacs.sqlite_db.model.archive.reaction.CaCSSQLiteDatabaseModelArchiveReaction attribute) (ncsw_data.storage.cacs.sqlite_db.model.archive.reaction_pattern.CaCSSQLiteDatabaseModelArchiveReactionPattern attribute) (ncsw_data.storage.cacs.sqlite_db.model.archive.reaction_pattern_source.CaCSSQLiteDatabaseModelArchiveReactionPatternSource attribute) (ncsw_data.storage.cacs.sqlite_db.model.archive.reaction_source.CaCSSQLiteDatabaseModelArchiveReactionSource attribute) (ncsw_data.storage.cacs.sqlite_db.model.archive.source.CaCSSQLiteDatabaseModelArchiveSource attribute) (ncsw_data.storage.cacs.sqlite_db.model.workbench.CaCSSQLiteDatabaseModelWorkbenchCompound attribute) (ncsw_data.storage.cacs.sqlite_db.model.workbench.CaCSSQLiteDatabaseModelWorkbenchCompoundArchive attribute) (ncsw_data.storage.cacs.sqlite_db.model.workbench.CaCSSQLiteDatabaseModelWorkbenchCompoundPattern attribute) (ncsw_data.storage.cacs.sqlite_db.model.workbench.CaCSSQLiteDatabaseModelWorkbenchCompoundPatternArchive attribute) (ncsw_data.storage.cacs.sqlite_db.model.workbench.CaCSSQLiteDatabaseModelWorkbenchReaction attribute) (ncsw_data.storage.cacs.sqlite_db.model.workbench.CaCSSQLiteDatabaseModelWorkbenchReactionArchive attribute) (ncsw_data.storage.cacs.sqlite_db.model.workbench.CaCSSQLiteDatabaseModelWorkbenchReactionPattern attribute) (ncsw_data.storage.cacs.sqlite_db.model.workbench.CaCSSQLiteDatabaseModelWorkbenchReactionPatternArchive attribute) (ncsw_data.storage.cacs.sqlite_db.model.workbench.CaCSSQLiteDatabaseModelWorkbenchReactionProductCompound attribute) (ncsw_data.storage.cacs.sqlite_db.model.workbench.CaCSSQLiteDatabaseModelWorkbenchReactionProductCompoundPattern attribute) (ncsw_data.storage.cacs.sqlite_db.model.workbench.CaCSSQLiteDatabaseModelWorkbenchReactionReactantCompound attribute) (ncsw_data.storage.cacs.sqlite_db.model.workbench.CaCSSQLiteDatabaseModelWorkbenchReactionReactantCompoundPattern attribute) (ncsw_data.storage.cacs.sqlite_db.model.workbench.CaCSSQLiteDatabaseModelWorkbenchReactionSpectatorCompound attribute) (ncsw_data.storage.cacs.sqlite_db.model.workbench.CaCSSQLiteDatabaseModelWorkbenchReactionSpectatorCompoundPattern attribute) (ncsw_data.storage.cacs.sqlite_db.model.workbench.CaCSSQLiteDatabaseModelWorkbenchReactionTransformationPattern attribute) (ncsw_data.storage.cacs.sqlite_db.model.workbench.compound.CaCSSQLiteDatabaseModelWorkbenchCompound attribute) (ncsw_data.storage.cacs.sqlite_db.model.workbench.compound_archive.CaCSSQLiteDatabaseModelWorkbenchCompoundArchive attribute) (ncsw_data.storage.cacs.sqlite_db.model.workbench.compound_pattern.CaCSSQLiteDatabaseModelWorkbenchCompoundPattern attribute) (ncsw_data.storage.cacs.sqlite_db.model.workbench.compound_pattern_archive.CaCSSQLiteDatabaseModelWorkbenchCompoundPatternArchive attribute) (ncsw_data.storage.cacs.sqlite_db.model.workbench.reaction.CaCSSQLiteDatabaseModelWorkbenchReaction attribute) (ncsw_data.storage.cacs.sqlite_db.model.workbench.reaction_archive.CaCSSQLiteDatabaseModelWorkbenchReactionArchive attribute) (ncsw_data.storage.cacs.sqlite_db.model.workbench.reaction_pattern.CaCSSQLiteDatabaseModelWorkbenchReactionPattern attribute) (ncsw_data.storage.cacs.sqlite_db.model.workbench.reaction_pattern_archive.CaCSSQLiteDatabaseModelWorkbenchReactionPatternArchive attribute) (ncsw_data.storage.cacs.sqlite_db.model.workbench.reaction_product_compound.CaCSSQLiteDatabaseModelWorkbenchReactionProductCompound attribute) (ncsw_data.storage.cacs.sqlite_db.model.workbench.reaction_product_compound_pattern.CaCSSQLiteDatabaseModelWorkbenchReactionProductCompoundPattern attribute) (ncsw_data.storage.cacs.sqlite_db.model.workbench.reaction_reactant_compound.CaCSSQLiteDatabaseModelWorkbenchReactionReactantCompound attribute) (ncsw_data.storage.cacs.sqlite_db.model.workbench.reaction_reactant_compound_pattern.CaCSSQLiteDatabaseModelWorkbenchReactionReactantCompoundPattern attribute) (ncsw_data.storage.cacs.sqlite_db.model.workbench.reaction_spectator_compound.CaCSSQLiteDatabaseModelWorkbenchReactionSpectatorCompound attribute) (ncsw_data.storage.cacs.sqlite_db.model.workbench.reaction_spectator_compound_pattern.CaCSSQLiteDatabaseModelWorkbenchReactionSpectatorCompoundPattern attribute) (ncsw_data.storage.cacs.sqlite_db.model.workbench.reaction_transformation_pattern.CaCSSQLiteDatabaseModelWorkbenchReactionTransformationPattern attribute)

_add_archive_source_where_clause_to_select_statement() (ncsw_data.storage.cacs.sqlite_db.utility.CaCSSQLiteDatabaseSelectUtility static method) (ncsw_data.storage.cacs.sqlite_db.utility.select_.CaCSSQLiteDatabaseSelectUtility static method) _insert_and_select_archive_compound_patterns() (ncsw_data.storage.cacs.sqlite_db.utility.CaCSSQLiteDatabaseInsertUtility static method) (ncsw_data.storage.cacs.sqlite_db.utility.insert_.CaCSSQLiteDatabaseInsertUtility static method) _insert_and_select_archive_compounds() (ncsw_data.storage.cacs.sqlite_db.utility.CaCSSQLiteDatabaseInsertUtility static method) (ncsw_data.storage.cacs.sqlite_db.utility.insert_.CaCSSQLiteDatabaseInsertUtility static method) _insert_and_select_archive_reaction_patterns() (ncsw_data.storage.cacs.sqlite_db.utility.CaCSSQLiteDatabaseInsertUtility static method) (ncsw_data.storage.cacs.sqlite_db.utility.insert_.CaCSSQLiteDatabaseInsertUtility static method) _insert_and_select_archive_reactions() (ncsw_data.storage.cacs.sqlite_db.utility.CaCSSQLiteDatabaseInsertUtility static method) (ncsw_data.storage.cacs.sqlite_db.utility.insert_.CaCSSQLiteDatabaseInsertUtility static method) _insert_and_select_workbench_compound_patterns() (ncsw_data.storage.cacs.sqlite_db.utility.CaCSSQLiteDatabaseInsertUtility static method) (ncsw_data.storage.cacs.sqlite_db.utility.insert_.CaCSSQLiteDatabaseInsertUtility static method) _insert_and_select_workbench_compounds() (ncsw_data.storage.cacs.sqlite_db.utility.CaCSSQLiteDatabaseInsertUtility static method) (ncsw_data.storage.cacs.sqlite_db.utility.insert_.CaCSSQLiteDatabaseInsertUtility static method) _insert_and_select_workbench_reaction_patterns() (ncsw_data.storage.cacs.sqlite_db.utility.CaCSSQLiteDatabaseInsertUtility static method) (ncsw_data.storage.cacs.sqlite_db.utility.insert_.CaCSSQLiteDatabaseInsertUtility static method) _insert_and_select_workbench_reactions() (ncsw_data.storage.cacs.sqlite_db.utility.CaCSSQLiteDatabaseInsertUtility static method) (ncsw_data.storage.cacs.sqlite_db.utility.insert_.CaCSSQLiteDatabaseInsertUtility static method) _insert_archive_compound_pattern_sources() (ncsw_data.storage.cacs.sqlite_db.utility.CaCSSQLiteDatabaseInsertUtility static method) (ncsw_data.storage.cacs.sqlite_db.utility.insert_.CaCSSQLiteDatabaseInsertUtility static method) _insert_archive_compound_sources() (ncsw_data.storage.cacs.sqlite_db.utility.CaCSSQLiteDatabaseInsertUtility static method) (ncsw_data.storage.cacs.sqlite_db.utility.insert_.CaCSSQLiteDatabaseInsertUtility static method) _insert_archive_reaction_pattern_sources() (ncsw_data.storage.cacs.sqlite_db.utility.CaCSSQLiteDatabaseInsertUtility static method) (ncsw_data.storage.cacs.sqlite_db.utility.insert_.CaCSSQLiteDatabaseInsertUtility static method) _insert_archive_reaction_sources() (ncsw_data.storage.cacs.sqlite_db.utility.CaCSSQLiteDatabaseInsertUtility static method) (ncsw_data.storage.cacs.sqlite_db.utility.insert_.CaCSSQLiteDatabaseInsertUtility static method) _insert_workbench_compound_archives() (ncsw_data.storage.cacs.sqlite_db.utility.CaCSSQLiteDatabaseInsertUtility static method) (ncsw_data.storage.cacs.sqlite_db.utility.insert_.CaCSSQLiteDatabaseInsertUtility static method) _insert_workbench_compound_pattern_archives() (ncsw_data.storage.cacs.sqlite_db.utility.CaCSSQLiteDatabaseInsertUtility static method) (ncsw_data.storage.cacs.sqlite_db.utility.insert_.CaCSSQLiteDatabaseInsertUtility static method) _insert_workbench_reaction_archives() (ncsw_data.storage.cacs.sqlite_db.utility.CaCSSQLiteDatabaseInsertUtility static method) (ncsw_data.storage.cacs.sqlite_db.utility.insert_.CaCSSQLiteDatabaseInsertUtility static method) _insert_workbench_reaction_pattern_archives() (ncsw_data.storage.cacs.sqlite_db.utility.CaCSSQLiteDatabaseInsertUtility static method) (ncsw_data.storage.cacs.sqlite_db.utility.insert_.CaCSSQLiteDatabaseInsertUtility static method) _insert_workbench_reaction_product_compound_patterns() (ncsw_data.storage.cacs.sqlite_db.utility.CaCSSQLiteDatabaseInsertUtility static method) (ncsw_data.storage.cacs.sqlite_db.utility.insert_.CaCSSQLiteDatabaseInsertUtility static method) _insert_workbench_reaction_product_compounds() (ncsw_data.storage.cacs.sqlite_db.utility.CaCSSQLiteDatabaseInsertUtility static method) (ncsw_data.storage.cacs.sqlite_db.utility.insert_.CaCSSQLiteDatabaseInsertUtility static method) _insert_workbench_reaction_reactant_compound_patterns() (ncsw_data.storage.cacs.sqlite_db.utility.CaCSSQLiteDatabaseInsertUtility static method) (ncsw_data.storage.cacs.sqlite_db.utility.insert_.CaCSSQLiteDatabaseInsertUtility static method) _insert_workbench_reaction_reactant_compounds() (ncsw_data.storage.cacs.sqlite_db.utility.CaCSSQLiteDatabaseInsertUtility static method) (ncsw_data.storage.cacs.sqlite_db.utility.insert_.CaCSSQLiteDatabaseInsertUtility static method) _insert_workbench_reaction_spectator_compound_patterns() (ncsw_data.storage.cacs.sqlite_db.utility.CaCSSQLiteDatabaseInsertUtility static method) (ncsw_data.storage.cacs.sqlite_db.utility.insert_.CaCSSQLiteDatabaseInsertUtility static method) _insert_workbench_reaction_spectator_compounds() (ncsw_data.storage.cacs.sqlite_db.utility.CaCSSQLiteDatabaseInsertUtility static method) (ncsw_data.storage.cacs.sqlite_db.utility.insert_.CaCSSQLiteDatabaseInsertUtility static method) _insert_workbench_reaction_transformation_patterns() (ncsw_data.storage.cacs.sqlite_db.utility.CaCSSQLiteDatabaseInsertUtility static method) (ncsw_data.storage.cacs.sqlite_db.utility.insert_.CaCSSQLiteDatabaseInsertUtility static method) _parse_v_1976_to_2016_cml_by_20121009_lowe_d_m_file() (ncsw_data.source.reaction.uspto.utility.formatting.USPTOReactionDatasetFormattingUtility static method) (ncsw_data.source.reaction.uspto.utility.USPTOReactionDatasetFormattingUtility static method) _parse_v_release_file() (ncsw_data.source.reaction.ord.utility.formatting.OpenReactionDatabaseFormattingUtility static method) (ncsw_data.source.reaction.ord.utility.OpenReactionDatabaseFormattingUtility static method)

A

archive_compound_id (ncsw_data.storage.cacs.sqlite_db.model.archive.CaCSSQLiteDatabaseModelArchiveCompoundSource attribute) (ncsw_data.storage.cacs.sqlite_db.model.archive.compound_source.CaCSSQLiteDatabaseModelArchiveCompoundSource attribute) (ncsw_data.storage.cacs.sqlite_db.model.workbench.CaCSSQLiteDatabaseModelWorkbenchCompoundArchive attribute) (ncsw_data.storage.cacs.sqlite_db.model.workbench.compound_archive.CaCSSQLiteDatabaseModelWorkbenchCompoundArchive attribute) archive_compound_pattern_id (ncsw_data.storage.cacs.sqlite_db.model.archive.CaCSSQLiteDatabaseModelArchiveCompoundPatternSource attribute) (ncsw_data.storage.cacs.sqlite_db.model.archive.compound_pattern_source.CaCSSQLiteDatabaseModelArchiveCompoundPatternSource attribute) (ncsw_data.storage.cacs.sqlite_db.model.workbench.CaCSSQLiteDatabaseModelWorkbenchCompoundPatternArchive attribute) (ncsw_data.storage.cacs.sqlite_db.model.workbench.compound_pattern_archive.CaCSSQLiteDatabaseModelWorkbenchCompoundPatternArchive attribute) archive_compound_patterns (ncsw_data.storage.cacs.sqlite_db.model.archive.CaCSSQLiteDatabaseModelArchiveSource attribute) (ncsw_data.storage.cacs.sqlite_db.model.archive.source.CaCSSQLiteDatabaseModelArchiveSource attribute) (ncsw_data.storage.cacs.sqlite_db.model.workbench.CaCSSQLiteDatabaseModelWorkbenchCompoundPattern attribute) (ncsw_data.storage.cacs.sqlite_db.model.workbench.compound_pattern.CaCSSQLiteDatabaseModelWorkbenchCompoundPattern attribute) archive_compounds (ncsw_data.storage.cacs.sqlite_db.model.archive.CaCSSQLiteDatabaseModelArchiveSource attribute) (ncsw_data.storage.cacs.sqlite_db.model.archive.source.CaCSSQLiteDatabaseModelArchiveSource attribute) (ncsw_data.storage.cacs.sqlite_db.model.workbench.CaCSSQLiteDatabaseModelWorkbenchCompound attribute) (ncsw_data.storage.cacs.sqlite_db.model.workbench.compound.CaCSSQLiteDatabaseModelWorkbenchCompound attribute) archive_reaction_id (ncsw_data.storage.cacs.sqlite_db.model.archive.CaCSSQLiteDatabaseModelArchiveReactionSource attribute) (ncsw_data.storage.cacs.sqlite_db.model.archive.reaction_source.CaCSSQLiteDatabaseModelArchiveReactionSource attribute) (ncsw_data.storage.cacs.sqlite_db.model.workbench.CaCSSQLiteDatabaseModelWorkbenchReactionArchive attribute) (ncsw_data.storage.cacs.sqlite_db.model.workbench.reaction_archive.CaCSSQLiteDatabaseModelWorkbenchReactionArchive attribute) archive_reaction_pattern_id (ncsw_data.storage.cacs.sqlite_db.model.archive.CaCSSQLiteDatabaseModelArchiveReactionPatternSource attribute) (ncsw_data.storage.cacs.sqlite_db.model.archive.reaction_pattern_source.CaCSSQLiteDatabaseModelArchiveReactionPatternSource attribute) (ncsw_data.storage.cacs.sqlite_db.model.workbench.CaCSSQLiteDatabaseModelWorkbenchReactionPatternArchive attribute) (ncsw_data.storage.cacs.sqlite_db.model.workbench.reaction_pattern_archive.CaCSSQLiteDatabaseModelWorkbenchReactionPatternArchive attribute)

archive_reaction_patterns (ncsw_data.storage.cacs.sqlite_db.model.archive.CaCSSQLiteDatabaseModelArchiveSource attribute) (ncsw_data.storage.cacs.sqlite_db.model.archive.source.CaCSSQLiteDatabaseModelArchiveSource attribute) (ncsw_data.storage.cacs.sqlite_db.model.workbench.CaCSSQLiteDatabaseModelWorkbenchReactionPattern attribute) (ncsw_data.storage.cacs.sqlite_db.model.workbench.reaction_pattern.CaCSSQLiteDatabaseModelWorkbenchReactionPattern attribute) archive_reactions (ncsw_data.storage.cacs.sqlite_db.model.archive.CaCSSQLiteDatabaseModelArchiveSource attribute) (ncsw_data.storage.cacs.sqlite_db.model.archive.source.CaCSSQLiteDatabaseModelArchiveSource attribute) (ncsw_data.storage.cacs.sqlite_db.model.workbench.CaCSSQLiteDatabaseModelWorkbenchReaction attribute) (ncsw_data.storage.cacs.sqlite_db.model.workbench.reaction.CaCSSQLiteDatabaseModelWorkbenchReaction attribute) archive_source_id (ncsw_data.storage.cacs.sqlite_db.model.archive.CaCSSQLiteDatabaseModelArchiveCompoundPatternSource attribute) (ncsw_data.storage.cacs.sqlite_db.model.archive.CaCSSQLiteDatabaseModelArchiveCompoundSource attribute) (ncsw_data.storage.cacs.sqlite_db.model.archive.CaCSSQLiteDatabaseModelArchiveReactionPatternSource attribute) (ncsw_data.storage.cacs.sqlite_db.model.archive.CaCSSQLiteDatabaseModelArchiveReactionSource attribute) (ncsw_data.storage.cacs.sqlite_db.model.archive.compound_pattern_source.CaCSSQLiteDatabaseModelArchiveCompoundPatternSource attribute) (ncsw_data.storage.cacs.sqlite_db.model.archive.compound_source.CaCSSQLiteDatabaseModelArchiveCompoundSource attribute) (ncsw_data.storage.cacs.sqlite_db.model.archive.reaction_pattern_source.CaCSSQLiteDatabaseModelArchiveReactionPatternSource attribute) (ncsw_data.storage.cacs.sqlite_db.model.archive.reaction_source.CaCSSQLiteDatabaseModelArchiveReactionSource attribute) archive_sources (ncsw_data.storage.cacs.sqlite_db.model.archive.CaCSSQLiteDatabaseModelArchiveCompound attribute) (ncsw_data.storage.cacs.sqlite_db.model.archive.CaCSSQLiteDatabaseModelArchiveCompoundPattern attribute) (ncsw_data.storage.cacs.sqlite_db.model.archive.CaCSSQLiteDatabaseModelArchiveReaction attribute) (ncsw_data.storage.cacs.sqlite_db.model.archive.CaCSSQLiteDatabaseModelArchiveReactionPattern attribute) (ncsw_data.storage.cacs.sqlite_db.model.archive.compound.CaCSSQLiteDatabaseModelArchiveCompound attribute) (ncsw_data.storage.cacs.sqlite_db.model.archive.compound_pattern.CaCSSQLiteDatabaseModelArchiveCompoundPattern attribute) (ncsw_data.storage.cacs.sqlite_db.model.archive.reaction.CaCSSQLiteDatabaseModelArchiveReaction attribute) (ncsw_data.storage.cacs.sqlite_db.model.archive.reaction_pattern.CaCSSQLiteDatabaseModelArchiveReactionPattern attribute)

C

CaCSSQLiteDatabase (class in ncsw_data.storage.cacs.sqlite_db) (class in ncsw_data.storage.cacs.sqlite_db.sqlite_db) CaCSSQLiteDatabaseArchiveCompoundFromSourceTuple (in module ncsw_data.storage.cacs.sqlite_db.utility) (in module ncsw_data.storage.cacs.sqlite_db.utility.typing) CaCSSQLiteDatabaseArchiveCompoundPatternFromSourceTuple (in module ncsw_data.storage.cacs.sqlite_db.utility) (in module ncsw_data.storage.cacs.sqlite_db.utility.typing) CaCSSQLiteDatabaseArchiveCompoundPatternStandardizationCallable (in module ncsw_data.storage.cacs.sqlite_db) (in module ncsw_data.storage.cacs.sqlite_db.typing) CaCSSQLiteDatabaseArchiveCompoundPatternTuple (in module ncsw_data.storage.cacs.sqlite_db.utility) (in module ncsw_data.storage.cacs.sqlite_db.utility.typing) CaCSSQLiteDatabaseArchiveCompoundStandardizationCallable (in module ncsw_data.storage.cacs.sqlite_db) (in module ncsw_data.storage.cacs.sqlite_db.typing) CaCSSQLiteDatabaseArchiveCompoundTuple (in module ncsw_data.storage.cacs.sqlite_db.utility) (in module ncsw_data.storage.cacs.sqlite_db.utility.typing) CaCSSQLiteDatabaseArchiveReactionFromSourceTuple (in module ncsw_data.storage.cacs.sqlite_db.utility) (in module ncsw_data.storage.cacs.sqlite_db.utility.typing) CaCSSQLiteDatabaseArchiveReactionPatternFromSourceTuple (in module ncsw_data.storage.cacs.sqlite_db.utility) (in module ncsw_data.storage.cacs.sqlite_db.utility.typing) CaCSSQLiteDatabaseArchiveReactionPatternStandardizationCallable (in module ncsw_data.storage.cacs.sqlite_db) (in module ncsw_data.storage.cacs.sqlite_db.typing) CaCSSQLiteDatabaseArchiveReactionPatternTuple (in module ncsw_data.storage.cacs.sqlite_db.utility) (in module ncsw_data.storage.cacs.sqlite_db.utility.typing) CaCSSQLiteDatabaseArchiveReactionStandardizationCallable (in module ncsw_data.storage.cacs.sqlite_db) (in module ncsw_data.storage.cacs.sqlite_db.typing) CaCSSQLiteDatabaseArchiveReactionTuple (in module ncsw_data.storage.cacs.sqlite_db.utility) (in module ncsw_data.storage.cacs.sqlite_db.utility.typing) CaCSSQLiteDatabaseInsertUtility (class in ncsw_data.storage.cacs.sqlite_db.utility) (class in ncsw_data.storage.cacs.sqlite_db.utility.insert_) CaCSSQLiteDatabaseModelArchiveCompound (class in ncsw_data.storage.cacs.sqlite_db.model.archive) (class in ncsw_data.storage.cacs.sqlite_db.model.archive.compound) CaCSSQLiteDatabaseModelArchiveCompoundPattern (class in ncsw_data.storage.cacs.sqlite_db.model.archive) (class in ncsw_data.storage.cacs.sqlite_db.model.archive.compound_pattern) CaCSSQLiteDatabaseModelArchiveCompoundPatternSource (class in ncsw_data.storage.cacs.sqlite_db.model.archive) (class in ncsw_data.storage.cacs.sqlite_db.model.archive.compound_pattern_source) CaCSSQLiteDatabaseModelArchiveCompoundSource (class in ncsw_data.storage.cacs.sqlite_db.model.archive) (class in ncsw_data.storage.cacs.sqlite_db.model.archive.compound_source) CaCSSQLiteDatabaseModelArchiveReaction (class in ncsw_data.storage.cacs.sqlite_db.model.archive) (class in ncsw_data.storage.cacs.sqlite_db.model.archive.reaction) CaCSSQLiteDatabaseModelArchiveReactionPattern (class in ncsw_data.storage.cacs.sqlite_db.model.archive) (class in ncsw_data.storage.cacs.sqlite_db.model.archive.reaction_pattern) CaCSSQLiteDatabaseModelArchiveReactionPatternSource (class in ncsw_data.storage.cacs.sqlite_db.model.archive) (class in ncsw_data.storage.cacs.sqlite_db.model.archive.reaction_pattern_source) CaCSSQLiteDatabaseModelArchiveReactionSource (class in ncsw_data.storage.cacs.sqlite_db.model.archive) (class in ncsw_data.storage.cacs.sqlite_db.model.archive.reaction_source) CaCSSQLiteDatabaseModelArchiveSource (class in ncsw_data.storage.cacs.sqlite_db.model.archive) (class in ncsw_data.storage.cacs.sqlite_db.model.archive.source) CaCSSQLiteDatabaseModelBase (class in ncsw_data.storage.cacs.sqlite_db.model.base) (class in ncsw_data.storage.cacs.sqlite_db.model.base.base) CaCSSQLiteDatabaseModelReprMethodMixin (class in ncsw_data.storage.cacs.sqlite_db.model.base) (class in ncsw_data.storage.cacs.sqlite_db.model.base.mixin) CaCSSQLiteDatabaseModelTimestampColumnsMixin (class in ncsw_data.storage.cacs.sqlite_db.model.base) (class in ncsw_data.storage.cacs.sqlite_db.model.base.mixin) CaCSSQLiteDatabaseModelWorkbenchCompound (class in ncsw_data.storage.cacs.sqlite_db.model.workbench) (class in ncsw_data.storage.cacs.sqlite_db.model.workbench.compound) CaCSSQLiteDatabaseModelWorkbenchCompoundArchive (class in ncsw_data.storage.cacs.sqlite_db.model.workbench) (class in ncsw_data.storage.cacs.sqlite_db.model.workbench.compound_archive) CaCSSQLiteDatabaseModelWorkbenchCompoundPattern (class in ncsw_data.storage.cacs.sqlite_db.model.workbench) (class in ncsw_data.storage.cacs.sqlite_db.model.workbench.compound_pattern) CaCSSQLiteDatabaseModelWorkbenchCompoundPatternArchive (class in ncsw_data.storage.cacs.sqlite_db.model.workbench) (class in ncsw_data.storage.cacs.sqlite_db.model.workbench.compound_pattern_archive) CaCSSQLiteDatabaseModelWorkbenchReaction (class in ncsw_data.storage.cacs.sqlite_db.model.workbench) (class in ncsw_data.storage.cacs.sqlite_db.model.workbench.reaction) CaCSSQLiteDatabaseModelWorkbenchReactionArchive (class in ncsw_data.storage.cacs.sqlite_db.model.workbench) (class in ncsw_data.storage.cacs.sqlite_db.model.workbench.reaction_archive) CaCSSQLiteDatabaseModelWorkbenchReactionPattern (class in ncsw_data.storage.cacs.sqlite_db.model.workbench) (class in ncsw_data.storage.cacs.sqlite_db.model.workbench.reaction_pattern) CaCSSQLiteDatabaseModelWorkbenchReactionPatternArchive (class in ncsw_data.storage.cacs.sqlite_db.model.workbench) (class in ncsw_data.storage.cacs.sqlite_db.model.workbench.reaction_pattern_archive) CaCSSQLiteDatabaseModelWorkbenchReactionProductCompound (class in ncsw_data.storage.cacs.sqlite_db.model.workbench) (class in ncsw_data.storage.cacs.sqlite_db.model.workbench.reaction_product_compound) CaCSSQLiteDatabaseModelWorkbenchReactionProductCompoundPattern (class in ncsw_data.storage.cacs.sqlite_db.model.workbench) (class in ncsw_data.storage.cacs.sqlite_db.model.workbench.reaction_product_compound_pattern) CaCSSQLiteDatabaseModelWorkbenchReactionReactantCompound (class in ncsw_data.storage.cacs.sqlite_db.model.workbench) (class in ncsw_data.storage.cacs.sqlite_db.model.workbench.reaction_reactant_compound) CaCSSQLiteDatabaseModelWorkbenchReactionReactantCompoundPattern (class in ncsw_data.storage.cacs.sqlite_db.model.workbench) (class in ncsw_data.storage.cacs.sqlite_db.model.workbench.reaction_reactant_compound_pattern) CaCSSQLiteDatabaseModelWorkbenchReactionSpectatorCompound (class in ncsw_data.storage.cacs.sqlite_db.model.workbench) (class in ncsw_data.storage.cacs.sqlite_db.model.workbench.reaction_spectator_compound) CaCSSQLiteDatabaseModelWorkbenchReactionSpectatorCompoundPattern (class in ncsw_data.storage.cacs.sqlite_db.model.workbench) (class in ncsw_data.storage.cacs.sqlite_db.model.workbench.reaction_spectator_compound_pattern) CaCSSQLiteDatabaseModelWorkbenchReactionTransformationPattern (class in ncsw_data.storage.cacs.sqlite_db.model.workbench) (class in ncsw_data.storage.cacs.sqlite_db.model.workbench.reaction_transformation_pattern) CaCSSQLiteDatabaseSelectUtility (class in ncsw_data.storage.cacs.sqlite_db.utility) (class in ncsw_data.storage.cacs.sqlite_db.utility.select_) CaCSSQLiteDatabaseWorkbenchCompoundFromSourceTuple (in module ncsw_data.storage.cacs.sqlite_db.utility) (in module ncsw_data.storage.cacs.sqlite_db.utility.typing)

CaCSSQLiteDatabaseWorkbenchCompoundPatternFromSourceTuple (in module ncsw_data.storage.cacs.sqlite_db.utility) (in module ncsw_data.storage.cacs.sqlite_db.utility.typing) CaCSSQLiteDatabaseWorkbenchCompoundPatternTuple (in module ncsw_data.storage.cacs.sqlite_db.utility) (in module ncsw_data.storage.cacs.sqlite_db.utility.typing) CaCSSQLiteDatabaseWorkbenchCompoundTuple (in module ncsw_data.storage.cacs.sqlite_db.utility) (in module ncsw_data.storage.cacs.sqlite_db.utility.typing) CaCSSQLiteDatabaseWorkbenchReactionFromSourceTuple (in module ncsw_data.storage.cacs.sqlite_db.utility) (in module ncsw_data.storage.cacs.sqlite_db.utility.typing) CaCSSQLiteDatabaseWorkbenchReactionPatternExtractionCallable (in module ncsw_data.storage.cacs.sqlite_db) (in module ncsw_data.storage.cacs.sqlite_db.typing) CaCSSQLiteDatabaseWorkbenchReactionPatternFromSourceTuple (in module ncsw_data.storage.cacs.sqlite_db.utility) (in module ncsw_data.storage.cacs.sqlite_db.utility.typing) CaCSSQLiteDatabaseWorkbenchReactionPatternTuple (in module ncsw_data.storage.cacs.sqlite_db.utility) (in module ncsw_data.storage.cacs.sqlite_db.utility.typing) CaCSSQLiteDatabaseWorkbenchReactionTuple (in module ncsw_data.storage.cacs.sqlite_db.utility) (in module ncsw_data.storage.cacs.sqlite_db.utility.typing) ChEMBLCompoundDatabase (class in ncsw_data.source.compound.chembl) (class in ncsw_data.source.compound.chembl.chembl) ChEMBLCompoundDatabaseDownloadUtility (class in ncsw_data.source.compound.chembl.utility) (class in ncsw_data.source.compound.chembl.utility.download) ChEMBLCompoundDatabaseExtractionUtility (class in ncsw_data.source.compound.chembl.utility) (class in ncsw_data.source.compound.chembl.utility.extraction) ChEMBLCompoundDatabaseFormattingUtility (class in ncsw_data.source.compound.chembl.utility) (class in ncsw_data.source.compound.chembl.utility.formatting) ChemicalReactionDatabase (class in ncsw_data.source.reaction.crd) (class in ncsw_data.source.reaction.crd.crd) ChemicalReactionDatabaseDownloadUtility (class in ncsw_data.source.reaction.crd.utility) (class in ncsw_data.source.reaction.crd.utility.download) ChemicalReactionDatabaseExtractionUtility (class in ncsw_data.source.reaction.crd.utility) (class in ncsw_data.source.reaction.crd.utility.extraction) ChemicalReactionDatabaseFormattingUtility (class in ncsw_data.source.reaction.crd.utility) (class in ncsw_data.source.reaction.crd.utility.formatting) COCONUTCompoundDatabase (class in ncsw_data.source.compound.coconut) (class in ncsw_data.source.compound.coconut.coconut) COCONUTCompoundDatabaseDownloadUtility (class in ncsw_data.source.compound.coconut.utility) (class in ncsw_data.source.compound.coconut.utility.download) COCONUTCompoundDatabaseExtractionUtility (class in ncsw_data.source.compound.coconut.utility) (class in ncsw_data.source.compound.coconut.utility.extraction) COCONUTCompoundDatabaseFormattingUtility (class in ncsw_data.source.compound.coconut.utility) (class in ncsw_data.source.compound.coconut.utility.formatting) CompoundDataSource (class in ncsw_data.source.compound) (class in ncsw_data.source.compound.compound) CompoundPatternDataSource (class in ncsw_data.source.compound_pattern) (class in ncsw_data.source.compound_pattern.compound_pattern) construct_archive_compound_from_source_select_statement() (ncsw_data.storage.cacs.sqlite_db.utility.CaCSSQLiteDatabaseSelectUtility static method) (ncsw_data.storage.cacs.sqlite_db.utility.select_.CaCSSQLiteDatabaseSelectUtility static method) construct_archive_compound_pattern_from_source_select_statement() (ncsw_data.storage.cacs.sqlite_db.utility.CaCSSQLiteDatabaseSelectUtility static method) (ncsw_data.storage.cacs.sqlite_db.utility.select_.CaCSSQLiteDatabaseSelectUtility static method) construct_archive_compound_pattern_select_statement() (ncsw_data.storage.cacs.sqlite_db.utility.CaCSSQLiteDatabaseSelectUtility static method) (ncsw_data.storage.cacs.sqlite_db.utility.select_.CaCSSQLiteDatabaseSelectUtility static method) construct_archive_compound_select_statement() (ncsw_data.storage.cacs.sqlite_db.utility.CaCSSQLiteDatabaseSelectUtility static method) (ncsw_data.storage.cacs.sqlite_db.utility.select_.CaCSSQLiteDatabaseSelectUtility static method) construct_archive_reaction_from_source_select_statement() (ncsw_data.storage.cacs.sqlite_db.utility.CaCSSQLiteDatabaseSelectUtility static method) (ncsw_data.storage.cacs.sqlite_db.utility.select_.CaCSSQLiteDatabaseSelectUtility static method) construct_archive_reaction_pattern_from_source_select_statement() (ncsw_data.storage.cacs.sqlite_db.utility.CaCSSQLiteDatabaseSelectUtility static method) (ncsw_data.storage.cacs.sqlite_db.utility.select_.CaCSSQLiteDatabaseSelectUtility static method) construct_archive_reaction_pattern_select_statement() (ncsw_data.storage.cacs.sqlite_db.utility.CaCSSQLiteDatabaseSelectUtility static method) (ncsw_data.storage.cacs.sqlite_db.utility.select_.CaCSSQLiteDatabaseSelectUtility static method) construct_archive_reaction_select_statement() (ncsw_data.storage.cacs.sqlite_db.utility.CaCSSQLiteDatabaseSelectUtility static method) (ncsw_data.storage.cacs.sqlite_db.utility.select_.CaCSSQLiteDatabaseSelectUtility static method) construct_reversed_synthesis_route_select_statement() (ncsw_data.storage.cacs.sqlite_db.utility.CaCSSQLiteDatabaseSelectUtility static method) (ncsw_data.storage.cacs.sqlite_db.utility.select_.CaCSSQLiteDatabaseSelectUtility static method) construct_workbench_compound_from_source_select_statement() (ncsw_data.storage.cacs.sqlite_db.utility.CaCSSQLiteDatabaseSelectUtility static method) (ncsw_data.storage.cacs.sqlite_db.utility.select_.CaCSSQLiteDatabaseSelectUtility static method) construct_workbench_compound_pattern_from_source_select_statement() (ncsw_data.storage.cacs.sqlite_db.utility.CaCSSQLiteDatabaseSelectUtility static method) (ncsw_data.storage.cacs.sqlite_db.utility.select_.CaCSSQLiteDatabaseSelectUtility static method) construct_workbench_compound_pattern_select_statement() (ncsw_data.storage.cacs.sqlite_db.utility.CaCSSQLiteDatabaseSelectUtility static method) (ncsw_data.storage.cacs.sqlite_db.utility.select_.CaCSSQLiteDatabaseSelectUtility static method) construct_workbench_compound_select_statement() (ncsw_data.storage.cacs.sqlite_db.utility.CaCSSQLiteDatabaseSelectUtility static method) (ncsw_data.storage.cacs.sqlite_db.utility.select_.CaCSSQLiteDatabaseSelectUtility static method) construct_workbench_reaction_from_source_select_statement() (ncsw_data.storage.cacs.sqlite_db.utility.CaCSSQLiteDatabaseSelectUtility static method) (ncsw_data.storage.cacs.sqlite_db.utility.select_.CaCSSQLiteDatabaseSelectUtility static method) construct_workbench_reaction_pattern_from_source_select_statement() (ncsw_data.storage.cacs.sqlite_db.utility.CaCSSQLiteDatabaseSelectUtility static method) (ncsw_data.storage.cacs.sqlite_db.utility.select_.CaCSSQLiteDatabaseSelectUtility static method) construct_workbench_reaction_pattern_select_statement() (ncsw_data.storage.cacs.sqlite_db.utility.CaCSSQLiteDatabaseSelectUtility static method) (ncsw_data.storage.cacs.sqlite_db.utility.select_.CaCSSQLiteDatabaseSelectUtility static method) construct_workbench_reaction_select_statement() (ncsw_data.storage.cacs.sqlite_db.utility.CaCSSQLiteDatabaseSelectUtility static method) (ncsw_data.storage.cacs.sqlite_db.utility.select_.CaCSSQLiteDatabaseSelectUtility static method) create_tables() (ncsw_data.storage.cacs.sqlite_db.CaCSSQLiteDatabase method) (ncsw_data.storage.cacs.sqlite_db.sqlite_db.CaCSSQLiteDatabase method) created_at (ncsw_data.storage.cacs.sqlite_db.model.base.CaCSSQLiteDatabaseModelTimestampColumnsMixin attribute) (ncsw_data.storage.cacs.sqlite_db.model.base.mixin.CaCSSQLiteDatabaseModelTimestampColumnsMixin attribute) created_by (ncsw_data.storage.cacs.sqlite_db.model.base.CaCSSQLiteDatabaseModelTimestampColumnsMixin attribute) (ncsw_data.storage.cacs.sqlite_db.model.base.mixin.CaCSSQLiteDatabaseModelTimestampColumnsMixin attribute)

D

DataSourceBase (class in ncsw_data.source.base) (class in ncsw_data.source.base.base) DataSourceDownloadUtility (class in ncsw_data.source.base.utility) (class in ncsw_data.source.base.utility.download) DataStorageBase (class in ncsw_data.storage.base) (class in ncsw_data.storage.base.base) download() (ncsw_data.source.base.base.DataSourceBase method) (ncsw_data.source.base.DataSourceBase method) (ncsw_data.source.compound.chembl.chembl.ChEMBLCompoundDatabase method) (ncsw_data.source.compound.chembl.ChEMBLCompoundDatabase method) (ncsw_data.source.compound.coconut.coconut.COCONUTCompoundDatabase method) (ncsw_data.source.compound.coconut.COCONUTCompoundDatabase method) (ncsw_data.source.compound.compound.CompoundDataSource method) (ncsw_data.source.compound.CompoundDataSource method) (ncsw_data.source.compound.miscellaneous.miscellaneous.MiscellaneousCompoundDataSource method) (ncsw_data.source.compound.miscellaneous.MiscellaneousCompoundDataSource method) (ncsw_data.source.compound.zinc.zinc.ZINCCompoundDatabase method) (ncsw_data.source.compound.zinc.ZINCCompoundDatabase method) (ncsw_data.source.compound_pattern.compound_pattern.CompoundPatternDataSource method) (ncsw_data.source.compound_pattern.CompoundPatternDataSource method) (ncsw_data.source.compound_pattern.rdkit.rdkit.RDKitCompoundPatternDataset method) (ncsw_data.source.compound_pattern.rdkit.RDKitCompoundPatternDataset method) (ncsw_data.source.reaction.crd.ChemicalReactionDatabase method) (ncsw_data.source.reaction.crd.crd.ChemicalReactionDatabase method) (ncsw_data.source.reaction.miscellaneous.miscellaneous.MiscellaneousReactionDataSource method) (ncsw_data.source.reaction.miscellaneous.MiscellaneousReactionDataSource method) (ncsw_data.source.reaction.ord.OpenReactionDatabase method) (ncsw_data.source.reaction.ord.ord.OpenReactionDatabase method) (ncsw_data.source.reaction.reaction.ReactionDataSource method) (ncsw_data.source.reaction.ReactionDataSource method) (ncsw_data.source.reaction.rhea.rhea.RheaReactionDatabase method) (ncsw_data.source.reaction.rhea.RheaReactionDatabase method) (ncsw_data.source.reaction.uspto.uspto.USPTOReactionDataset method) (ncsw_data.source.reaction.uspto.USPTOReactionDataset method) (ncsw_data.source.reaction_pattern.miscellaneous.miscellaneous.MiscellaneousReactionPatternDataSource method) (ncsw_data.source.reaction_pattern.miscellaneous.MiscellaneousReactionPatternDataSource method) (ncsw_data.source.reaction_pattern.reaction_pattern.ReactionPatternDataSource method) (ncsw_data.source.reaction_pattern.ReactionPatternDataSource method) (ncsw_data.source.reaction_pattern.retro_rules.retro_rules.RetroRulesReactionPatternDatabase method) (ncsw_data.source.reaction_pattern.retro_rules.RetroRulesReactionPatternDatabase method) download_file() (ncsw_data.source.base.utility.DataSourceDownloadUtility static method) (ncsw_data.source.base.utility.download.DataSourceDownloadUtility static method) download_v_15k_by_20170418_coley_c_w_et_al() (ncsw_data.source.reaction.uspto.utility.download.USPTOReactionDatasetDownloadUtility static method) (ncsw_data.source.reaction.uspto.utility.USPTOReactionDatasetDownloadUtility static method) download_v_1976_to_2013_by_20121009_lowe_d_m() (ncsw_data.source.reaction.uspto.utility.download.USPTOReactionDatasetDownloadUtility static method) (ncsw_data.source.reaction.uspto.utility.USPTOReactionDatasetDownloadUtility static method) download_v_1976_to_2016_by_20121009_lowe_d_m() (ncsw_data.source.reaction.uspto.utility.download.USPTOReactionDatasetDownloadUtility static method) (ncsw_data.source.reaction.uspto.utility.USPTOReactionDatasetDownloadUtility static method) download_v_1976_to_2016_remapped_by_20210407_schwaller_p_et_al() (ncsw_data.source.reaction.uspto.utility.download.USPTOReactionDatasetDownloadUtility static method) (ncsw_data.source.reaction.uspto.utility.USPTOReactionDatasetDownloadUtility static method) download_v_1k_tpl_by_20210128_schwaller_p_et_al() (ncsw_data.source.reaction.uspto.utility.download.USPTOReactionDatasetDownloadUtility static method) (ncsw_data.source.reaction.uspto.utility.USPTOReactionDatasetDownloadUtility static method) download_v_20131008_kraut_h_et_al() (ncsw_data.source.reaction.miscellaneous.utility.download.MiscellaneousReactionDataSourceDownloadUtility static method) (ncsw_data.source.reaction.miscellaneous.utility.MiscellaneousReactionDataSourceDownloadUtility static method) download_v_20161014_wei_j_n_et_al() (ncsw_data.source.reaction.miscellaneous.utility.download.MiscellaneousReactionDataSourceDownloadUtility static method) (ncsw_data.source.reaction.miscellaneous.utility.MiscellaneousReactionDataSourceDownloadUtility static method)

download_v_20200508_grambow_c_et_al() (ncsw_data.source.reaction.miscellaneous.utility.download.MiscellaneousReactionDataSourceDownloadUtility static method) (ncsw_data.source.reaction.miscellaneous.utility.MiscellaneousReactionDataSourceDownloadUtility static method) download_v_2_0_by_20241126_chandrasekhar_v_et_al() (ncsw_data.source.compound.coconut.utility.COCONUTCompoundDatabaseDownloadUtility static method) (ncsw_data.source.compound.coconut.utility.download.COCONUTCompoundDatabaseDownloadUtility static method) download_v_480k_or_mit_by_20171204_jin_w_et_al() (ncsw_data.source.reaction.uspto.utility.download.USPTOReactionDatasetDownloadUtility static method) (ncsw_data.source.reaction.uspto.utility.USPTOReactionDatasetDownloadUtility static method) download_v_50k_by_20141226_schneider_n_et_al() (ncsw_data.source.reaction.uspto.utility.download.USPTOReactionDatasetDownloadUtility static method) (ncsw_data.source.reaction.uspto.utility.USPTOReactionDatasetDownloadUtility static method) download_v_50k_by_20161122_schneider_n_et_al() (ncsw_data.source.reaction.uspto.utility.download.USPTOReactionDatasetDownloadUtility static method) (ncsw_data.source.reaction.uspto.utility.USPTOReactionDatasetDownloadUtility static method) download_v_50k_by_20170905_liu_b_et_al() (ncsw_data.source.reaction.uspto.utility.download.USPTOReactionDatasetDownloadUtility static method) (ncsw_data.source.reaction.uspto.utility.USPTOReactionDatasetDownloadUtility static method) download_v_50k_by_20171116_coley_c_w_et_al() (ncsw_data.source.reaction.uspto.utility.download.USPTOReactionDatasetDownloadUtility static method) (ncsw_data.source.reaction.uspto.utility.USPTOReactionDatasetDownloadUtility static method) download_v_auto_template_by_20240627_chen_l_and_li_y() (ncsw_data.source.reaction_pattern.miscellaneous.utility.download.MiscellaneousReactionPatternDataSourceDownloadUtility static method) (ncsw_data.source.reaction_pattern.miscellaneous.utility.MiscellaneousReactionPatternDataSourceDownloadUtility static method) download_v_building_block() (ncsw_data.source.compound.zinc.utility.download.ZINCCompoundDatabaseDownloadUtility static method) (ncsw_data.source.compound.zinc.utility.ZINCCompoundDatabaseDownloadUtility static method) download_v_by_20180622_schwaller_p_et_al() (ncsw_data.source.reaction.uspto.utility.download.USPTOReactionDatasetDownloadUtility static method) (ncsw_data.source.reaction.uspto.utility.USPTOReactionDatasetDownloadUtility static method) download_v_catalog() (ncsw_data.source.compound.zinc.utility.download.ZINCCompoundDatabaseDownloadUtility static method) (ncsw_data.source.compound.zinc.utility.ZINCCompoundDatabaseDownloadUtility static method) download_v_chen_s_et_al() (ncsw_data.source.reaction.uspto.utility.download.USPTOReactionDatasetDownloadUtility static method) (ncsw_data.source.reaction.uspto.utility.USPTOReactionDatasetDownloadUtility static method) download_v_dingos_by_20190701_button_a_et_al() (ncsw_data.source.reaction_pattern.miscellaneous.utility.download.MiscellaneousReactionPatternDataSourceDownloadUtility static method) (ncsw_data.source.reaction_pattern.miscellaneous.utility.MiscellaneousReactionPatternDataSourceDownloadUtility static method) download_v_golden_dataset_by_20211102_lin_a_et_al() (ncsw_data.source.reaction.miscellaneous.utility.download.MiscellaneousReactionDataSourceDownloadUtility static method) (ncsw_data.source.reaction.miscellaneous.utility.MiscellaneousReactionDataSourceDownloadUtility static method) download_v_htl_by_20080307_brenk_r_et_al() (ncsw_data.source.compound_pattern.rdkit.utility.download.RDKitCompoundPatternDatasetDownloadUtility static method) (ncsw_data.source.compound_pattern.rdkit.utility.RDKitCompoundPatternDatasetDownloadUtility static method) download_v_lef_by_20181221_bradshaw_j_et_al() (ncsw_data.source.reaction.uspto.utility.download.USPTOReactionDatasetDownloadUtility static method) (ncsw_data.source.reaction.uspto.utility.USPTOReactionDatasetDownloadUtility static method) download_v_moses_by_20201218_polykovskiy_d_et_al() (ncsw_data.source.compound.miscellaneous.utility.download.MiscellaneousCompoundDataSourceDownloadUtility static method) (ncsw_data.source.compound.miscellaneous.utility.MiscellaneousCompoundDataSourceDownloadUtility static method) download_v_orderly() (ncsw_data.source.reaction.miscellaneous.utility.download.MiscellaneousReactionDataSourceDownloadUtility static method) (ncsw_data.source.reaction.miscellaneous.utility.MiscellaneousReactionDataSourceDownloadUtility static method) download_v_pains_by_20100204_baell_j_b_and_holloway_g_a() (ncsw_data.source.compound_pattern.rdkit.utility.download.RDKitCompoundPatternDatasetDownloadUtility static method) (ncsw_data.source.compound_pattern.rdkit.utility.RDKitCompoundPatternDatasetDownloadUtility static method) download_v_rdb7_by_20220718_spiekermann_k_et_al() (ncsw_data.source.reaction.miscellaneous.utility.download.MiscellaneousReactionDataSourceDownloadUtility static method) (ncsw_data.source.reaction.miscellaneous.utility.MiscellaneousReactionDataSourceDownloadUtility static method) download_v_reaction_smiles() (ncsw_data.source.reaction.crd.utility.ChemicalReactionDatabaseDownloadUtility static method) (ncsw_data.source.reaction.crd.utility.download.ChemicalReactionDatabaseDownloadUtility static method) download_v_release() (ncsw_data.source.compound.chembl.utility.ChEMBLCompoundDatabaseDownloadUtility static method) (ncsw_data.source.compound.chembl.utility.download.ChEMBLCompoundDatabaseDownloadUtility static method) (ncsw_data.source.reaction.ord.utility.download.OpenReactionDatabaseDownloadUtility static method) (ncsw_data.source.reaction.ord.utility.OpenReactionDatabaseDownloadUtility static method) (ncsw_data.source.reaction.rhea.utility.download.RheaReactionDatabaseDownloadUtility static method) (ncsw_data.source.reaction.rhea.utility.RheaReactionDatabaseDownloadUtility static method) (ncsw_data.source.reaction_pattern.retro_rules.utility.download.RetroRulesReactionPatternDatabaseDownloadUtility static method) (ncsw_data.source.reaction_pattern.retro_rules.utility.RetroRulesReactionPatternDatabaseDownloadUtility static method) download_v_retro_transform_db_by_20180421_avramova_s_et_al() (ncsw_data.source.reaction_pattern.miscellaneous.utility.download.MiscellaneousReactionPatternDataSourceDownloadUtility static method) (ncsw_data.source.reaction_pattern.miscellaneous.utility.MiscellaneousReactionPatternDataSourceDownloadUtility static method) drop_tables() (ncsw_data.storage.cacs.sqlite_db.CaCSSQLiteDatabase method) (ncsw_data.storage.cacs.sqlite_db.sqlite_db.CaCSSQLiteDatabase method)

E

execute_select_statement() (ncsw_data.storage.cacs.sqlite_db.CaCSSQLiteDatabase method) (ncsw_data.storage.cacs.sqlite_db.sqlite_db.CaCSSQLiteDatabase method) extract() (ncsw_data.source.base.base.DataSourceBase method) (ncsw_data.source.base.DataSourceBase method) (ncsw_data.source.compound.chembl.chembl.ChEMBLCompoundDatabase method) (ncsw_data.source.compound.chembl.ChEMBLCompoundDatabase method) (ncsw_data.source.compound.coconut.coconut.COCONUTCompoundDatabase method) (ncsw_data.source.compound.coconut.COCONUTCompoundDatabase method) (ncsw_data.source.compound.compound.CompoundDataSource method) (ncsw_data.source.compound.CompoundDataSource method) (ncsw_data.source.compound.miscellaneous.miscellaneous.MiscellaneousCompoundDataSource method) (ncsw_data.source.compound.miscellaneous.MiscellaneousCompoundDataSource method) (ncsw_data.source.compound.zinc.zinc.ZINCCompoundDatabase method) (ncsw_data.source.compound.zinc.ZINCCompoundDatabase method) (ncsw_data.source.compound_pattern.compound_pattern.CompoundPatternDataSource method) (ncsw_data.source.compound_pattern.CompoundPatternDataSource method) (ncsw_data.source.compound_pattern.rdkit.rdkit.RDKitCompoundPatternDataset method) (ncsw_data.source.compound_pattern.rdkit.RDKitCompoundPatternDataset method) (ncsw_data.source.reaction.crd.ChemicalReactionDatabase method) (ncsw_data.source.reaction.crd.crd.ChemicalReactionDatabase method) (ncsw_data.source.reaction.miscellaneous.miscellaneous.MiscellaneousReactionDataSource method) (ncsw_data.source.reaction.miscellaneous.MiscellaneousReactionDataSource method) (ncsw_data.source.reaction.ord.OpenReactionDatabase method) (ncsw_data.source.reaction.ord.ord.OpenReactionDatabase method) (ncsw_data.source.reaction.reaction.ReactionDataSource method) (ncsw_data.source.reaction.ReactionDataSource method) (ncsw_data.source.reaction.rhea.rhea.RheaReactionDatabase method) (ncsw_data.source.reaction.rhea.RheaReactionDatabase method) (ncsw_data.source.reaction.uspto.uspto.USPTOReactionDataset method) (ncsw_data.source.reaction.uspto.USPTOReactionDataset method) (ncsw_data.source.reaction_pattern.miscellaneous.miscellaneous.MiscellaneousReactionPatternDataSource method) (ncsw_data.source.reaction_pattern.miscellaneous.MiscellaneousReactionPatternDataSource method) (ncsw_data.source.reaction_pattern.reaction_pattern.ReactionPatternDataSource method) (ncsw_data.source.reaction_pattern.ReactionPatternDataSource method) (ncsw_data.source.reaction_pattern.retro_rules.retro_rules.RetroRulesReactionPatternDatabase method) (ncsw_data.source.reaction_pattern.retro_rules.RetroRulesReactionPatternDatabase method) extract_v_15k_by_20170418_coley_c_w_et_al() (ncsw_data.source.reaction.uspto.utility.extraction.USPTOReactionDatasetExtractionUtility static method) (ncsw_data.source.reaction.uspto.utility.USPTOReactionDatasetExtractionUtility static method) extract_v_1976_to_2013_rsmi_by_20121009_lowe_d_m() (ncsw_data.source.reaction.uspto.utility.extraction.USPTOReactionDatasetExtractionUtility static method) (ncsw_data.source.reaction.uspto.utility.USPTOReactionDatasetExtractionUtility static method)

extract_v_1976_to_2016_by_20121009_lowe_d_m() (ncsw_data.source.reaction.uspto.utility.extraction.USPTOReactionDatasetExtractionUtility static method) (ncsw_data.source.reaction.uspto.utility.USPTOReactionDatasetExtractionUtility static method) extract_v_1976_to_2016_remapped_by_20210407_schwaller_p_et_al() (ncsw_data.source.reaction.uspto.utility.extraction.USPTOReactionDatasetExtractionUtility static method) (ncsw_data.source.reaction.uspto.utility.USPTOReactionDatasetExtractionUtility static method) extract_v_1k_tpl_by_20210128_schwaller_p_et_al() (ncsw_data.source.reaction.uspto.utility.extraction.USPTOReactionDatasetExtractionUtility static method) (ncsw_data.source.reaction.uspto.utility.USPTOReactionDatasetExtractionUtility static method) extract_v_20131008_kraut_h_et_al() (ncsw_data.source.reaction.miscellaneous.utility.extraction.MiscellaneousReactionDataSourceExtractionUtility static method) (ncsw_data.source.reaction.miscellaneous.utility.MiscellaneousReactionDataSourceExtractionUtility static method) extract_v_2_0_by_20241126_chandrasekhar_v_et_al() (ncsw_data.source.compound.coconut.utility.COCONUTCompoundDatabaseExtractionUtility static method) (ncsw_data.source.compound.coconut.utility.extraction.COCONUTCompoundDatabaseExtractionUtility static method) extract_v_480k_or_mit_by_20171204_jin_w_et_al() (ncsw_data.source.reaction.uspto.utility.extraction.USPTOReactionDatasetExtractionUtility static method) (ncsw_data.source.reaction.uspto.utility.USPTOReactionDatasetExtractionUtility static method) extract_v_50k_by_20141226_schneider_n_et_al() (ncsw_data.source.reaction.uspto.utility.extraction.USPTOReactionDatasetExtractionUtility static method) (ncsw_data.source.reaction.uspto.utility.USPTOReactionDatasetExtractionUtility static method) extract_v_50k_by_20161122_schneider_n_et_al() (ncsw_data.source.reaction.uspto.utility.extraction.USPTOReactionDatasetExtractionUtility static method) (ncsw_data.source.reaction.uspto.utility.USPTOReactionDatasetExtractionUtility static method) extract_v_auto_template_by_20240627_chen_l_and_li_y() (ncsw_data.source.reaction_pattern.miscellaneous.utility.extraction.MiscellaneousReactionPatternDataSourceExtractionUtility static method) (ncsw_data.source.reaction_pattern.miscellaneous.utility.MiscellaneousReactionPatternDataSourceExtractionUtility static method) extract_v_building_block() (ncsw_data.source.compound.zinc.utility.extraction.ZINCCompoundDatabaseExtractionUtility static method) (ncsw_data.source.compound.zinc.utility.ZINCCompoundDatabaseExtractionUtility static method) extract_v_by_20180622_schwaller_p_et_al() (ncsw_data.source.reaction.uspto.utility.extraction.USPTOReactionDatasetExtractionUtility static method) (ncsw_data.source.reaction.uspto.utility.USPTOReactionDatasetExtractionUtility static method) extract_v_golden_dataset_by_20211102_lin_a_et_al() (ncsw_data.source.reaction.miscellaneous.utility.extraction.MiscellaneousReactionDataSourceExtractionUtility static method) (ncsw_data.source.reaction.miscellaneous.utility.MiscellaneousReactionDataSourceExtractionUtility static method) extract_v_lef_by_20181221_bradshaw_j_et_al() (ncsw_data.source.reaction.uspto.utility.extraction.USPTOReactionDatasetExtractionUtility static method) (ncsw_data.source.reaction.uspto.utility.USPTOReactionDatasetExtractionUtility static method) extract_v_reaction_smiles() (ncsw_data.source.reaction.crd.utility.ChemicalReactionDatabaseExtractionUtility static method) (ncsw_data.source.reaction.crd.utility.extraction.ChemicalReactionDatabaseExtractionUtility static method) extract_v_release() (ncsw_data.source.compound.chembl.utility.ChEMBLCompoundDatabaseExtractionUtility static method) (ncsw_data.source.compound.chembl.utility.extraction.ChEMBLCompoundDatabaseExtractionUtility static method) (ncsw_data.source.reaction.ord.utility.extraction.OpenReactionDatabaseExtractionUtility static method) (ncsw_data.source.reaction.ord.utility.OpenReactionDatabaseExtractionUtility static method) (ncsw_data.source.reaction.rhea.utility.extraction.RheaReactionDatabaseExtractionUtility static method) (ncsw_data.source.reaction.rhea.utility.RheaReactionDatabaseExtractionUtility static method) (ncsw_data.source.reaction_pattern.retro_rules.utility.extraction.RetroRulesReactionPatternDatabaseExtractionUtility static method) (ncsw_data.source.reaction_pattern.retro_rules.utility.RetroRulesReactionPatternDatabaseExtractionUtility static method) extract_workbench_reaction_transformation_patterns() (ncsw_data.storage.cacs.sqlite_db.CaCSSQLiteDatabase method) (ncsw_data.storage.cacs.sqlite_db.sqlite_db.CaCSSQLiteDatabase method)

F

file_name (ncsw_data.storage.cacs.sqlite_db.model.archive.CaCSSQLiteDatabaseModelArchiveSource attribute) (ncsw_data.storage.cacs.sqlite_db.model.archive.source.CaCSSQLiteDatabaseModelArchiveSource attribute) format() (ncsw_data.source.base.base.DataSourceBase method) (ncsw_data.source.base.DataSourceBase method) (ncsw_data.source.compound.chembl.chembl.ChEMBLCompoundDatabase method) (ncsw_data.source.compound.chembl.ChEMBLCompoundDatabase method) (ncsw_data.source.compound.coconut.coconut.COCONUTCompoundDatabase method) (ncsw_data.source.compound.coconut.COCONUTCompoundDatabase method) (ncsw_data.source.compound.compound.CompoundDataSource method) (ncsw_data.source.compound.CompoundDataSource method) (ncsw_data.source.compound.miscellaneous.miscellaneous.MiscellaneousCompoundDataSource method) (ncsw_data.source.compound.miscellaneous.MiscellaneousCompoundDataSource method) (ncsw_data.source.compound.zinc.zinc.ZINCCompoundDatabase method) (ncsw_data.source.compound.zinc.ZINCCompoundDatabase method) (ncsw_data.source.compound_pattern.compound_pattern.CompoundPatternDataSource method) (ncsw_data.source.compound_pattern.CompoundPatternDataSource method) (ncsw_data.source.compound_pattern.rdkit.rdkit.RDKitCompoundPatternDataset method) (ncsw_data.source.compound_pattern.rdkit.RDKitCompoundPatternDataset method) (ncsw_data.source.reaction.crd.ChemicalReactionDatabase method) (ncsw_data.source.reaction.crd.crd.ChemicalReactionDatabase method) (ncsw_data.source.reaction.miscellaneous.miscellaneous.MiscellaneousReactionDataSource method) (ncsw_data.source.reaction.miscellaneous.MiscellaneousReactionDataSource method) (ncsw_data.source.reaction.ord.OpenReactionDatabase method) (ncsw_data.source.reaction.ord.ord.OpenReactionDatabase method) (ncsw_data.source.reaction.reaction.ReactionDataSource method) (ncsw_data.source.reaction.ReactionDataSource method) (ncsw_data.source.reaction.rhea.rhea.RheaReactionDatabase method) (ncsw_data.source.reaction.rhea.RheaReactionDatabase method) (ncsw_data.source.reaction.uspto.uspto.USPTOReactionDataset method) (ncsw_data.source.reaction.uspto.USPTOReactionDataset method) (ncsw_data.source.reaction_pattern.miscellaneous.miscellaneous.MiscellaneousReactionPatternDataSource method) (ncsw_data.source.reaction_pattern.miscellaneous.MiscellaneousReactionPatternDataSource method) (ncsw_data.source.reaction_pattern.reaction_pattern.ReactionPatternDataSource method) (ncsw_data.source.reaction_pattern.ReactionPatternDataSource method) (ncsw_data.source.reaction_pattern.retro_rules.retro_rules.RetroRulesReactionPatternDatabase method) (ncsw_data.source.reaction_pattern.retro_rules.RetroRulesReactionPatternDatabase method) format_v_15k_by_20170418_coley_c_w_et_al() (ncsw_data.source.reaction.uspto.utility.formatting.USPTOReactionDatasetFormattingUtility static method) (ncsw_data.source.reaction.uspto.utility.USPTOReactionDatasetFormattingUtility static method) format_v_1976_to_2013_rsmi_by_20121009_lowe_d_m() (ncsw_data.source.reaction.uspto.utility.formatting.USPTOReactionDatasetFormattingUtility static method) (ncsw_data.source.reaction.uspto.utility.USPTOReactionDatasetFormattingUtility static method) format_v_1976_to_2016_by_20121009_lowe_d_m() (ncsw_data.source.reaction.uspto.utility.formatting.USPTOReactionDatasetFormattingUtility static method) (ncsw_data.source.reaction.uspto.utility.USPTOReactionDatasetFormattingUtility static method) format_v_1976_to_2016_remapped_by_20210407_schwaller_p_et_al() (ncsw_data.source.reaction.uspto.utility.formatting.USPTOReactionDatasetFormattingUtility static method) (ncsw_data.source.reaction.uspto.utility.USPTOReactionDatasetFormattingUtility static method) format_v_1k_tpl_by_20210128_schwaller_p_et_al() (ncsw_data.source.reaction.uspto.utility.formatting.USPTOReactionDatasetFormattingUtility static method) (ncsw_data.source.reaction.uspto.utility.USPTOReactionDatasetFormattingUtility static method) format_v_20131008_kraut_h_et_al() (ncsw_data.source.reaction.miscellaneous.utility.formatting.MiscellaneousReactionDataSourceFormattingUtility static method) (ncsw_data.source.reaction.miscellaneous.utility.MiscellaneousReactionDataSourceFormattingUtility static method) format_v_20161014_wei_j_n_et_al() (ncsw_data.source.reaction.miscellaneous.utility.formatting.MiscellaneousReactionDataSourceFormattingUtility static method) (ncsw_data.source.reaction.miscellaneous.utility.MiscellaneousReactionDataSourceFormattingUtility static method) format_v_20200508_grambow_c_et_al() (ncsw_data.source.reaction.miscellaneous.utility.formatting.MiscellaneousReactionDataSourceFormattingUtility static method) (ncsw_data.source.reaction.miscellaneous.utility.MiscellaneousReactionDataSourceFormattingUtility static method)

format_v_2_0_by_20241126_chandrasekhar_v_et_al() (ncsw_data.source.compound.coconut.utility.COCONUTCompoundDatabaseFormattingUtility static method) (ncsw_data.source.compound.coconut.utility.formatting.COCONUTCompoundDatabaseFormattingUtility static method) format_v_480k_or_mit_by_20171204_jin_w_et_al() (ncsw_data.source.reaction.uspto.utility.formatting.USPTOReactionDatasetFormattingUtility static method) (ncsw_data.source.reaction.uspto.utility.USPTOReactionDatasetFormattingUtility static method) format_v_50k_by_20141226_schneider_n_et_al() (ncsw_data.source.reaction.uspto.utility.formatting.USPTOReactionDatasetFormattingUtility static method) (ncsw_data.source.reaction.uspto.utility.USPTOReactionDatasetFormattingUtility static method) format_v_50k_by_20161122_schneider_n_et_al() (ncsw_data.source.reaction.uspto.utility.formatting.USPTOReactionDatasetFormattingUtility static method) (ncsw_data.source.reaction.uspto.utility.USPTOReactionDatasetFormattingUtility static method) format_v_50k_by_20170905_liu_b_et_al() (ncsw_data.source.reaction.uspto.utility.formatting.USPTOReactionDatasetFormattingUtility static method) (ncsw_data.source.reaction.uspto.utility.USPTOReactionDatasetFormattingUtility static method) format_v_50k_by_20171116_coley_c_w_et_al() (ncsw_data.source.reaction.uspto.utility.formatting.USPTOReactionDatasetFormattingUtility static method) (ncsw_data.source.reaction.uspto.utility.USPTOReactionDatasetFormattingUtility static method) format_v_auto_template_by_20240627_chen_l_and_li_y() (ncsw_data.source.reaction_pattern.miscellaneous.utility.formatting.MiscellaneousReactionPatternDataSourceFormattingUtility static method) (ncsw_data.source.reaction_pattern.miscellaneous.utility.MiscellaneousReactionPatternDataSourceFormattingUtility static method) format_v_building_block() (ncsw_data.source.compound.zinc.utility.formatting.ZINCCompoundDatabaseFormattingUtility static method) (ncsw_data.source.compound.zinc.utility.ZINCCompoundDatabaseFormattingUtility static method) format_v_by_20180622_schwaller_p_et_al() (ncsw_data.source.reaction.uspto.utility.formatting.USPTOReactionDatasetFormattingUtility static method) (ncsw_data.source.reaction.uspto.utility.USPTOReactionDatasetFormattingUtility static method) format_v_catalog() (ncsw_data.source.compound.zinc.utility.formatting.ZINCCompoundDatabaseFormattingUtility static method) (ncsw_data.source.compound.zinc.utility.ZINCCompoundDatabaseFormattingUtility static method) format_v_chen_s_et_al() (ncsw_data.source.reaction.uspto.utility.formatting.USPTOReactionDatasetFormattingUtility static method) (ncsw_data.source.reaction.uspto.utility.USPTOReactionDatasetFormattingUtility static method) format_v_dingos_by_20190701_button_a_et_al() (ncsw_data.source.reaction_pattern.miscellaneous.utility.formatting.MiscellaneousReactionPatternDataSourceFormattingUtility static method) (ncsw_data.source.reaction_pattern.miscellaneous.utility.MiscellaneousReactionPatternDataSourceFormattingUtility static method) format_v_golden_dataset_by_20211102_lin_a_et_al() (ncsw_data.source.reaction.miscellaneous.utility.formatting.MiscellaneousReactionDataSourceFormattingUtility static method) (ncsw_data.source.reaction.miscellaneous.utility.MiscellaneousReactionDataSourceFormattingUtility static method) format_v_htl_by_20080307_brenk_r_et_al() (ncsw_data.source.compound_pattern.rdkit.utility.formatting.RDKitCompoundPatternDatasetFormattingUtility static method) (ncsw_data.source.compound_pattern.rdkit.utility.RDKitCompoundPatternDatasetFormattingUtility static method) format_v_lef_by_20181221_bradshaw_j_et_al() (ncsw_data.source.reaction.uspto.utility.formatting.USPTOReactionDatasetFormattingUtility static method) (ncsw_data.source.reaction.uspto.utility.USPTOReactionDatasetFormattingUtility static method) format_v_moses_by_20201218_polykovskiy_d_et_al() (ncsw_data.source.compound.miscellaneous.utility.formatting.MiscellaneousCompoundDataSourceFormattingUtility static method) (ncsw_data.source.compound.miscellaneous.utility.MiscellaneousCompoundDataSourceFormattingUtility static method) format_v_orderly() (ncsw_data.source.reaction.miscellaneous.utility.formatting.MiscellaneousReactionDataSourceFormattingUtility static method) (ncsw_data.source.reaction.miscellaneous.utility.MiscellaneousReactionDataSourceFormattingUtility static method) format_v_pains_by_20100204_baell_j_b_and_holloway_g_a() (ncsw_data.source.compound_pattern.rdkit.utility.formatting.RDKitCompoundPatternDatasetFormattingUtility static method) (ncsw_data.source.compound_pattern.rdkit.utility.RDKitCompoundPatternDatasetFormattingUtility static method) format_v_rdb7_by_20220718_spiekermann_k_et_al() (ncsw_data.source.reaction.miscellaneous.utility.formatting.MiscellaneousReactionDataSourceFormattingUtility static method) (ncsw_data.source.reaction.miscellaneous.utility.MiscellaneousReactionDataSourceFormattingUtility static method) format_v_reaction_smiles() (ncsw_data.source.reaction.crd.utility.ChemicalReactionDatabaseFormattingUtility static method) (ncsw_data.source.reaction.crd.utility.formatting.ChemicalReactionDatabaseFormattingUtility static method) format_v_release() (ncsw_data.source.compound.chembl.utility.ChEMBLCompoundDatabaseFormattingUtility static method) (ncsw_data.source.compound.chembl.utility.formatting.ChEMBLCompoundDatabaseFormattingUtility static method) (ncsw_data.source.reaction.ord.utility.formatting.OpenReactionDatabaseFormattingUtility static method) (ncsw_data.source.reaction.ord.utility.OpenReactionDatabaseFormattingUtility static method) (ncsw_data.source.reaction.rhea.utility.formatting.RheaReactionDatabaseFormattingUtility static method) (ncsw_data.source.reaction.rhea.utility.RheaReactionDatabaseFormattingUtility static method) (ncsw_data.source.reaction_pattern.retro_rules.utility.formatting.RetroRulesReactionPatternDatabaseFormattingUtility static method) (ncsw_data.source.reaction_pattern.retro_rules.utility.RetroRulesReactionPatternDatabaseFormattingUtility static method) format_v_retro_transform_db_by_20180421_avramova_s_et_al() (ncsw_data.source.reaction_pattern.miscellaneous.utility.formatting.MiscellaneousReactionPatternDataSourceFormattingUtility static method) (ncsw_data.source.reaction_pattern.miscellaneous.utility.MiscellaneousReactionPatternDataSourceFormattingUtility static method)

G

get_names_of_supported_data_sources() (ncsw_data.source.compound.compound.CompoundDataSource method) (ncsw_data.source.compound.CompoundDataSource method) (ncsw_data.source.compound_pattern.compound_pattern.CompoundPatternDataSource method) (ncsw_data.source.compound_pattern.CompoundPatternDataSource method) (ncsw_data.source.reaction.reaction.ReactionDataSource method) (ncsw_data.source.reaction.ReactionDataSource method) (ncsw_data.source.reaction_pattern.reaction_pattern.ReactionPatternDataSource method) (ncsw_data.source.reaction_pattern.ReactionPatternDataSource method) get_supported_versions() (ncsw_data.source.compound.chembl.chembl.ChEMBLCompoundDatabase method) (ncsw_data.source.compound.chembl.ChEMBLCompoundDatabase method) (ncsw_data.source.compound.coconut.coconut.COCONUTCompoundDatabase static method) (ncsw_data.source.compound.coconut.COCONUTCompoundDatabase static method) (ncsw_data.source.compound.compound.CompoundDataSource method) (ncsw_data.source.compound.CompoundDataSource method) (ncsw_data.source.compound.miscellaneous.miscellaneous.MiscellaneousCompoundDataSource static method) (ncsw_data.source.compound.miscellaneous.MiscellaneousCompoundDataSource static method) (ncsw_data.source.compound.zinc.zinc.ZINCCompoundDatabase method) (ncsw_data.source.compound.zinc.ZINCCompoundDatabase method) (ncsw_data.source.compound_pattern.compound_pattern.CompoundPatternDataSource method) (ncsw_data.source.compound_pattern.CompoundPatternDataSource method) (ncsw_data.source.compound_pattern.rdkit.rdkit.RDKitCompoundPatternDataset static method) (ncsw_data.source.compound_pattern.rdkit.RDKitCompoundPatternDataset static method) (ncsw_data.source.reaction.crd.ChemicalReactionDatabase static method) (ncsw_data.source.reaction.crd.crd.ChemicalReactionDatabase static method) (ncsw_data.source.reaction.miscellaneous.miscellaneous.MiscellaneousReactionDataSource static method) (ncsw_data.source.reaction.miscellaneous.MiscellaneousReactionDataSource static method) (ncsw_data.source.reaction.ord.OpenReactionDatabase static method) (ncsw_data.source.reaction.ord.ord.OpenReactionDatabase static method) (ncsw_data.source.reaction.reaction.ReactionDataSource method) (ncsw_data.source.reaction.ReactionDataSource method) (ncsw_data.source.reaction.rhea.rhea.RheaReactionDatabase method) (ncsw_data.source.reaction.rhea.RheaReactionDatabase method) (ncsw_data.source.reaction.uspto.uspto.USPTOReactionDataset static method) (ncsw_data.source.reaction.uspto.USPTOReactionDataset static method) (ncsw_data.source.reaction_pattern.miscellaneous.miscellaneous.MiscellaneousReactionPatternDataSource static method) (ncsw_data.source.reaction_pattern.miscellaneous.MiscellaneousReactionPatternDataSource static method) (ncsw_data.source.reaction_pattern.reaction_pattern.ReactionPatternDataSource method) (ncsw_data.source.reaction_pattern.ReactionPatternDataSource method) (ncsw_data.source.reaction_pattern.retro_rules.retro_rules.RetroRulesReactionPatternDatabase static method) (ncsw_data.source.reaction_pattern.retro_rules.RetroRulesReactionPatternDatabase static method)

I

id (ncsw_data.storage.cacs.sqlite_db.model.archive.CaCSSQLiteDatabaseModelArchiveCompound attribute) (ncsw_data.storage.cacs.sqlite_db.model.archive.CaCSSQLiteDatabaseModelArchiveCompoundPattern attribute) (ncsw_data.storage.cacs.sqlite_db.model.archive.CaCSSQLiteDatabaseModelArchiveReaction attribute) (ncsw_data.storage.cacs.sqlite_db.model.archive.CaCSSQLiteDatabaseModelArchiveReactionPattern attribute) (ncsw_data.storage.cacs.sqlite_db.model.archive.CaCSSQLiteDatabaseModelArchiveSource attribute) (ncsw_data.storage.cacs.sqlite_db.model.archive.compound.CaCSSQLiteDatabaseModelArchiveCompound attribute) (ncsw_data.storage.cacs.sqlite_db.model.archive.compound_pattern.CaCSSQLiteDatabaseModelArchiveCompoundPattern attribute) (ncsw_data.storage.cacs.sqlite_db.model.archive.reaction.CaCSSQLiteDatabaseModelArchiveReaction attribute) (ncsw_data.storage.cacs.sqlite_db.model.archive.reaction_pattern.CaCSSQLiteDatabaseModelArchiveReactionPattern attribute) (ncsw_data.storage.cacs.sqlite_db.model.archive.source.CaCSSQLiteDatabaseModelArchiveSource attribute) (ncsw_data.storage.cacs.sqlite_db.model.workbench.CaCSSQLiteDatabaseModelWorkbenchCompound attribute) (ncsw_data.storage.cacs.sqlite_db.model.workbench.CaCSSQLiteDatabaseModelWorkbenchCompoundPattern attribute) (ncsw_data.storage.cacs.sqlite_db.model.workbench.CaCSSQLiteDatabaseModelWorkbenchReaction attribute) (ncsw_data.storage.cacs.sqlite_db.model.workbench.CaCSSQLiteDatabaseModelWorkbenchReactionPattern attribute) (ncsw_data.storage.cacs.sqlite_db.model.workbench.compound.CaCSSQLiteDatabaseModelWorkbenchCompound attribute) (ncsw_data.storage.cacs.sqlite_db.model.workbench.compound_pattern.CaCSSQLiteDatabaseModelWorkbenchCompoundPattern attribute) (ncsw_data.storage.cacs.sqlite_db.model.workbench.reaction.CaCSSQLiteDatabaseModelWorkbenchReaction attribute) (ncsw_data.storage.cacs.sqlite_db.model.workbench.reaction_pattern.CaCSSQLiteDatabaseModelWorkbenchReactionPattern attribute) insert_and_select_archive_source() (ncsw_data.storage.cacs.sqlite_db.utility.CaCSSQLiteDatabaseInsertUtility static method) (ncsw_data.storage.cacs.sqlite_db.utility.insert_.CaCSSQLiteDatabaseInsertUtility static method) insert_archive_compound_patterns() (ncsw_data.storage.cacs.sqlite_db.CaCSSQLiteDatabase method) (ncsw_data.storage.cacs.sqlite_db.sqlite_db.CaCSSQLiteDatabase method) (ncsw_data.storage.cacs.sqlite_db.utility.CaCSSQLiteDatabaseInsertUtility static method) (ncsw_data.storage.cacs.sqlite_db.utility.insert_.CaCSSQLiteDatabaseInsertUtility static method)

insert_archive_compounds() (ncsw_data.storage.cacs.sqlite_db.CaCSSQLiteDatabase method) (ncsw_data.storage.cacs.sqlite_db.sqlite_db.CaCSSQLiteDatabase method) (ncsw_data.storage.cacs.sqlite_db.utility.CaCSSQLiteDatabaseInsertUtility static method) (ncsw_data.storage.cacs.sqlite_db.utility.insert_.CaCSSQLiteDatabaseInsertUtility static method) insert_archive_reaction_patterns() (ncsw_data.storage.cacs.sqlite_db.CaCSSQLiteDatabase method) (ncsw_data.storage.cacs.sqlite_db.sqlite_db.CaCSSQLiteDatabase method) (ncsw_data.storage.cacs.sqlite_db.utility.CaCSSQLiteDatabaseInsertUtility static method) (ncsw_data.storage.cacs.sqlite_db.utility.insert_.CaCSSQLiteDatabaseInsertUtility static method) insert_archive_reactions() (ncsw_data.storage.cacs.sqlite_db.CaCSSQLiteDatabase method) (ncsw_data.storage.cacs.sqlite_db.sqlite_db.CaCSSQLiteDatabase method) (ncsw_data.storage.cacs.sqlite_db.utility.CaCSSQLiteDatabaseInsertUtility static method) (ncsw_data.storage.cacs.sqlite_db.utility.insert_.CaCSSQLiteDatabaseInsertUtility static method) insert_workbench_compound_patterns() (ncsw_data.storage.cacs.sqlite_db.utility.CaCSSQLiteDatabaseInsertUtility static method) (ncsw_data.storage.cacs.sqlite_db.utility.insert_.CaCSSQLiteDatabaseInsertUtility static method) insert_workbench_compounds() (ncsw_data.storage.cacs.sqlite_db.utility.CaCSSQLiteDatabaseInsertUtility static method) (ncsw_data.storage.cacs.sqlite_db.utility.insert_.CaCSSQLiteDatabaseInsertUtility static method) insert_workbench_reaction_patterns() (ncsw_data.storage.cacs.sqlite_db.utility.CaCSSQLiteDatabaseInsertUtility static method) (ncsw_data.storage.cacs.sqlite_db.utility.insert_.CaCSSQLiteDatabaseInsertUtility static method) insert_workbench_reaction_transformation_patterns() (ncsw_data.storage.cacs.sqlite_db.utility.CaCSSQLiteDatabaseInsertUtility static method) (ncsw_data.storage.cacs.sqlite_db.utility.insert_.CaCSSQLiteDatabaseInsertUtility static method) insert_workbench_reactions() (ncsw_data.storage.cacs.sqlite_db.utility.CaCSSQLiteDatabaseInsertUtility static method) (ncsw_data.storage.cacs.sqlite_db.utility.insert_.CaCSSQLiteDatabaseInsertUtility static method) is_building_block (ncsw_data.storage.cacs.sqlite_db.model.workbench.CaCSSQLiteDatabaseModelWorkbenchCompound attribute) (ncsw_data.storage.cacs.sqlite_db.model.workbench.compound.CaCSSQLiteDatabaseModelWorkbenchCompound attribute)

L

logger (ncsw_data.source.base.base.DataSourceBase property) (ncsw_data.source.base.DataSourceBase property) (ncsw_data.storage.base.base.DataStorageBase property) (ncsw_data.storage.base.DataStorageBase property)

M

migrate_archive_to_workbench_compound_patterns() (ncsw_data.storage.cacs.sqlite_db.CaCSSQLiteDatabase method) (ncsw_data.storage.cacs.sqlite_db.sqlite_db.CaCSSQLiteDatabase method) migrate_archive_to_workbench_compounds() (ncsw_data.storage.cacs.sqlite_db.CaCSSQLiteDatabase method) (ncsw_data.storage.cacs.sqlite_db.sqlite_db.CaCSSQLiteDatabase method) migrate_archive_to_workbench_reaction_patterns() (ncsw_data.storage.cacs.sqlite_db.CaCSSQLiteDatabase method) (ncsw_data.storage.cacs.sqlite_db.sqlite_db.CaCSSQLiteDatabase method) migrate_archive_to_workbench_reactions() (ncsw_data.storage.cacs.sqlite_db.CaCSSQLiteDatabase method) (ncsw_data.storage.cacs.sqlite_db.sqlite_db.CaCSSQLiteDatabase method) MiscellaneousCompoundDataSource (class in ncsw_data.source.compound.miscellaneous) (class in ncsw_data.source.compound.miscellaneous.miscellaneous) MiscellaneousCompoundDataSourceDownloadUtility (class in ncsw_data.source.compound.miscellaneous.utility) (class in ncsw_data.source.compound.miscellaneous.utility.download) MiscellaneousCompoundDataSourceExtractionUtility (class in ncsw_data.source.compound.miscellaneous.utility) (class in ncsw_data.source.compound.miscellaneous.utility.extraction) MiscellaneousCompoundDataSourceFormattingUtility (class in ncsw_data.source.compound.miscellaneous.utility) (class in ncsw_data.source.compound.miscellaneous.utility.formatting) MiscellaneousReactionDataSource (class in ncsw_data.source.reaction.miscellaneous) (class in ncsw_data.source.reaction.miscellaneous.miscellaneous) MiscellaneousReactionDataSourceDownloadUtility (class in ncsw_data.source.reaction.miscellaneous.utility) (class in ncsw_data.source.reaction.miscellaneous.utility.download) MiscellaneousReactionDataSourceExtractionUtility (class in ncsw_data.source.reaction.miscellaneous.utility) (class in ncsw_data.source.reaction.miscellaneous.utility.extraction) MiscellaneousReactionDataSourceFormattingUtility (class in ncsw_data.source.reaction.miscellaneous.utility) (class in ncsw_data.source.reaction.miscellaneous.utility.formatting) MiscellaneousReactionPatternDataSource (class in ncsw_data.source.reaction_pattern.miscellaneous) (class in ncsw_data.source.reaction_pattern.miscellaneous.miscellaneous) MiscellaneousReactionPatternDataSourceDownloadUtility (class in ncsw_data.source.reaction_pattern.miscellaneous.utility) (class in ncsw_data.source.reaction_pattern.miscellaneous.utility.download) MiscellaneousReactionPatternDataSourceExtractionUtility (class in ncsw_data.source.reaction_pattern.miscellaneous.utility) (class in ncsw_data.source.reaction_pattern.miscellaneous.utility.extraction) MiscellaneousReactionPatternDataSourceFormattingUtility (class in ncsw_data.source.reaction_pattern.miscellaneous.utility) (class in ncsw_data.source.reaction_pattern.miscellaneous.utility.formatting) module ncsw_data ncsw_data.source ncsw_data.source.base ncsw_data.source.base.base ncsw_data.source.base.utility ncsw_data.source.base.utility.download ncsw_data.source.compound ncsw_data.source.compound.chembl ncsw_data.source.compound.chembl.chembl ncsw_data.source.compound.chembl.utility ncsw_data.source.compound.chembl.utility.download ncsw_data.source.compound.chembl.utility.extraction ncsw_data.source.compound.chembl.utility.formatting ncsw_data.source.compound.coconut ncsw_data.source.compound.coconut.coconut ncsw_data.source.compound.coconut.utility ncsw_data.source.compound.coconut.utility.download ncsw_data.source.compound.coconut.utility.extraction ncsw_data.source.compound.coconut.utility.formatting ncsw_data.source.compound.compound ncsw_data.source.compound.miscellaneous ncsw_data.source.compound.miscellaneous.miscellaneous ncsw_data.source.compound.miscellaneous.utility ncsw_data.source.compound.miscellaneous.utility.download ncsw_data.source.compound.miscellaneous.utility.extraction ncsw_data.source.compound.miscellaneous.utility.formatting ncsw_data.source.compound.zinc ncsw_data.source.compound.zinc.utility ncsw_data.source.compound.zinc.utility.download ncsw_data.source.compound.zinc.utility.extraction ncsw_data.source.compound.zinc.utility.formatting ncsw_data.source.compound.zinc.zinc ncsw_data.source.compound_pattern ncsw_data.source.compound_pattern.compound_pattern ncsw_data.source.compound_pattern.rdkit ncsw_data.source.compound_pattern.rdkit.rdkit ncsw_data.source.compound_pattern.rdkit.utility ncsw_data.source.compound_pattern.rdkit.utility.download ncsw_data.source.compound_pattern.rdkit.utility.extraction ncsw_data.source.compound_pattern.rdkit.utility.formatting ncsw_data.source.reaction ncsw_data.source.reaction.crd ncsw_data.source.reaction.crd.crd ncsw_data.source.reaction.crd.utility ncsw_data.source.reaction.crd.utility.download ncsw_data.source.reaction.crd.utility.extraction ncsw_data.source.reaction.crd.utility.formatting ncsw_data.source.reaction.miscellaneous ncsw_data.source.reaction.miscellaneous.miscellaneous ncsw_data.source.reaction.miscellaneous.utility ncsw_data.source.reaction.miscellaneous.utility.download ncsw_data.source.reaction.miscellaneous.utility.extraction ncsw_data.source.reaction.miscellaneous.utility.formatting ncsw_data.source.reaction.ord ncsw_data.source.reaction.ord.ord ncsw_data.source.reaction.ord.utility ncsw_data.source.reaction.ord.utility.download ncsw_data.source.reaction.ord.utility.extraction ncsw_data.source.reaction.ord.utility.formatting ncsw_data.source.reaction.reaction ncsw_data.source.reaction.rhea ncsw_data.source.reaction.rhea.rhea ncsw_data.source.reaction.rhea.utility ncsw_data.source.reaction.rhea.utility.download ncsw_data.source.reaction.rhea.utility.extraction ncsw_data.source.reaction.rhea.utility.formatting ncsw_data.source.reaction.uspto ncsw_data.source.reaction.uspto.uspto ncsw_data.source.reaction.uspto.utility ncsw_data.source.reaction.uspto.utility.download ncsw_data.source.reaction.uspto.utility.extraction ncsw_data.source.reaction.uspto.utility.formatting ncsw_data.source.reaction_pattern ncsw_data.source.reaction_pattern.miscellaneous ncsw_data.source.reaction_pattern.miscellaneous.miscellaneous ncsw_data.source.reaction_pattern.miscellaneous.utility ncsw_data.source.reaction_pattern.miscellaneous.utility.download ncsw_data.source.reaction_pattern.miscellaneous.utility.extraction ncsw_data.source.reaction_pattern.miscellaneous.utility.formatting ncsw_data.source.reaction_pattern.reaction_pattern ncsw_data.source.reaction_pattern.retro_rules ncsw_data.source.reaction_pattern.retro_rules.retro_rules ncsw_data.source.reaction_pattern.retro_rules.utility ncsw_data.source.reaction_pattern.retro_rules.utility.download ncsw_data.source.reaction_pattern.retro_rules.utility.extraction ncsw_data.source.reaction_pattern.retro_rules.utility.formatting ncsw_data.storage ncsw_data.storage.base ncsw_data.storage.base.base ncsw_data.storage.cacs ncsw_data.storage.cacs.sqlite_db ncsw_data.storage.cacs.sqlite_db.model ncsw_data.storage.cacs.sqlite_db.model.archive ncsw_data.storage.cacs.sqlite_db.model.archive.compound ncsw_data.storage.cacs.sqlite_db.model.archive.compound_pattern ncsw_data.storage.cacs.sqlite_db.model.archive.compound_pattern_source ncsw_data.storage.cacs.sqlite_db.model.archive.compound_source ncsw_data.storage.cacs.sqlite_db.model.archive.reaction ncsw_data.storage.cacs.sqlite_db.model.archive.reaction_pattern ncsw_data.storage.cacs.sqlite_db.model.archive.reaction_pattern_source ncsw_data.storage.cacs.sqlite_db.model.archive.reaction_source ncsw_data.storage.cacs.sqlite_db.model.archive.source ncsw_data.storage.cacs.sqlite_db.model.base ncsw_data.storage.cacs.sqlite_db.model.base.base ncsw_data.storage.cacs.sqlite_db.model.base.mixin ncsw_data.storage.cacs.sqlite_db.model.workbench ncsw_data.storage.cacs.sqlite_db.model.workbench.compound ncsw_data.storage.cacs.sqlite_db.model.workbench.compound_archive ncsw_data.storage.cacs.sqlite_db.model.workbench.compound_pattern ncsw_data.storage.cacs.sqlite_db.model.workbench.compound_pattern_archive ncsw_data.storage.cacs.sqlite_db.model.workbench.reaction ncsw_data.storage.cacs.sqlite_db.model.workbench.reaction_archive ncsw_data.storage.cacs.sqlite_db.model.workbench.reaction_pattern ncsw_data.storage.cacs.sqlite_db.model.workbench.reaction_pattern_archive ncsw_data.storage.cacs.sqlite_db.model.workbench.reaction_product_compound ncsw_data.storage.cacs.sqlite_db.model.workbench.reaction_product_compound_pattern ncsw_data.storage.cacs.sqlite_db.model.workbench.reaction_reactant_compound ncsw_data.storage.cacs.sqlite_db.model.workbench.reaction_reactant_compound_pattern ncsw_data.storage.cacs.sqlite_db.model.workbench.reaction_spectator_compound ncsw_data.storage.cacs.sqlite_db.model.workbench.reaction_spectator_compound_pattern ncsw_data.storage.cacs.sqlite_db.model.workbench.reaction_transformation_pattern ncsw_data.storage.cacs.sqlite_db.sqlite_db ncsw_data.storage.cacs.sqlite_db.typing ncsw_data.storage.cacs.sqlite_db.utility ncsw_data.storage.cacs.sqlite_db.utility.insert_ ncsw_data.storage.cacs.sqlite_db.utility.select_ ncsw_data.storage.cacs.sqlite_db.utility.typing

N

name (ncsw_data.storage.cacs.sqlite_db.model.archive.CaCSSQLiteDatabaseModelArchiveSource attribute) (ncsw_data.storage.cacs.sqlite_db.model.archive.source.CaCSSQLiteDatabaseModelArchiveSource attribute) ncsw_data module ncsw_data.source module ncsw_data.source.base module ncsw_data.source.base.base module ncsw_data.source.base.utility module ncsw_data.source.base.utility.download module ncsw_data.source.compound module ncsw_data.source.compound.chembl module ncsw_data.source.compound.chembl.chembl module ncsw_data.source.compound.chembl.utility module ncsw_data.source.compound.chembl.utility.download module ncsw_data.source.compound.chembl.utility.extraction module ncsw_data.source.compound.chembl.utility.formatting module ncsw_data.source.compound.coconut module ncsw_data.source.compound.coconut.coconut module ncsw_data.source.compound.coconut.utility module ncsw_data.source.compound.coconut.utility.download module ncsw_data.source.compound.coconut.utility.extraction module ncsw_data.source.compound.coconut.utility.formatting module ncsw_data.source.compound.compound module ncsw_data.source.compound.miscellaneous module ncsw_data.source.compound.miscellaneous.miscellaneous module ncsw_data.source.compound.miscellaneous.utility module ncsw_data.source.compound.miscellaneous.utility.download module ncsw_data.source.compound.miscellaneous.utility.extraction module ncsw_data.source.compound.miscellaneous.utility.formatting module ncsw_data.source.compound.zinc module ncsw_data.source.compound.zinc.utility module ncsw_data.source.compound.zinc.utility.download module ncsw_data.source.compound.zinc.utility.extraction module ncsw_data.source.compound.zinc.utility.formatting module ncsw_data.source.compound.zinc.zinc module ncsw_data.source.compound_pattern module ncsw_data.source.compound_pattern.compound_pattern module ncsw_data.source.compound_pattern.rdkit module ncsw_data.source.compound_pattern.rdkit.rdkit module ncsw_data.source.compound_pattern.rdkit.utility module ncsw_data.source.compound_pattern.rdkit.utility.download module ncsw_data.source.compound_pattern.rdkit.utility.extraction module ncsw_data.source.compound_pattern.rdkit.utility.formatting module ncsw_data.source.reaction module ncsw_data.source.reaction.crd module ncsw_data.source.reaction.crd.crd module ncsw_data.source.reaction.crd.utility module ncsw_data.source.reaction.crd.utility.download module ncsw_data.source.reaction.crd.utility.extraction module ncsw_data.source.reaction.crd.utility.formatting module ncsw_data.source.reaction.miscellaneous module ncsw_data.source.reaction.miscellaneous.miscellaneous module ncsw_data.source.reaction.miscellaneous.utility module ncsw_data.source.reaction.miscellaneous.utility.download module ncsw_data.source.reaction.miscellaneous.utility.extraction module ncsw_data.source.reaction.miscellaneous.utility.formatting module ncsw_data.source.reaction.ord module ncsw_data.source.reaction.ord.ord module ncsw_data.source.reaction.ord.utility module ncsw_data.source.reaction.ord.utility.download module ncsw_data.source.reaction.ord.utility.extraction module ncsw_data.source.reaction.ord.utility.formatting module ncsw_data.source.reaction.reaction module ncsw_data.source.reaction.rhea module ncsw_data.source.reaction.rhea.rhea module ncsw_data.source.reaction.rhea.utility module

ncsw_data.source.reaction.rhea.utility.download module ncsw_data.source.reaction.rhea.utility.extraction module ncsw_data.source.reaction.rhea.utility.formatting module ncsw_data.source.reaction.uspto module ncsw_data.source.reaction.uspto.uspto module ncsw_data.source.reaction.uspto.utility module ncsw_data.source.reaction.uspto.utility.download module ncsw_data.source.reaction.uspto.utility.extraction module ncsw_data.source.reaction.uspto.utility.formatting module ncsw_data.source.reaction_pattern module ncsw_data.source.reaction_pattern.miscellaneous module ncsw_data.source.reaction_pattern.miscellaneous.miscellaneous module ncsw_data.source.reaction_pattern.miscellaneous.utility module ncsw_data.source.reaction_pattern.miscellaneous.utility.download module ncsw_data.source.reaction_pattern.miscellaneous.utility.extraction module ncsw_data.source.reaction_pattern.miscellaneous.utility.formatting module ncsw_data.source.reaction_pattern.reaction_pattern module ncsw_data.source.reaction_pattern.retro_rules module ncsw_data.source.reaction_pattern.retro_rules.retro_rules module ncsw_data.source.reaction_pattern.retro_rules.utility module ncsw_data.source.reaction_pattern.retro_rules.utility.download module ncsw_data.source.reaction_pattern.retro_rules.utility.extraction module ncsw_data.source.reaction_pattern.retro_rules.utility.formatting module ncsw_data.storage module ncsw_data.storage.base module ncsw_data.storage.base.base module ncsw_data.storage.cacs module ncsw_data.storage.cacs.sqlite_db module ncsw_data.storage.cacs.sqlite_db.model module ncsw_data.storage.cacs.sqlite_db.model.archive module ncsw_data.storage.cacs.sqlite_db.model.archive.compound module ncsw_data.storage.cacs.sqlite_db.model.archive.compound_pattern module ncsw_data.storage.cacs.sqlite_db.model.archive.compound_pattern_source module ncsw_data.storage.cacs.sqlite_db.model.archive.compound_source module ncsw_data.storage.cacs.sqlite_db.model.archive.reaction module ncsw_data.storage.cacs.sqlite_db.model.archive.reaction_pattern module ncsw_data.storage.cacs.sqlite_db.model.archive.reaction_pattern_source module ncsw_data.storage.cacs.sqlite_db.model.archive.reaction_source module ncsw_data.storage.cacs.sqlite_db.model.archive.source module ncsw_data.storage.cacs.sqlite_db.model.base module ncsw_data.storage.cacs.sqlite_db.model.base.base module ncsw_data.storage.cacs.sqlite_db.model.base.mixin module ncsw_data.storage.cacs.sqlite_db.model.workbench module ncsw_data.storage.cacs.sqlite_db.model.workbench.compound module ncsw_data.storage.cacs.sqlite_db.model.workbench.compound_archive module ncsw_data.storage.cacs.sqlite_db.model.workbench.compound_pattern module ncsw_data.storage.cacs.sqlite_db.model.workbench.compound_pattern_archive module ncsw_data.storage.cacs.sqlite_db.model.workbench.reaction module ncsw_data.storage.cacs.sqlite_db.model.workbench.reaction_archive module ncsw_data.storage.cacs.sqlite_db.model.workbench.reaction_pattern module ncsw_data.storage.cacs.sqlite_db.model.workbench.reaction_pattern_archive module ncsw_data.storage.cacs.sqlite_db.model.workbench.reaction_product_compound module ncsw_data.storage.cacs.sqlite_db.model.workbench.reaction_product_compound_pattern module ncsw_data.storage.cacs.sqlite_db.model.workbench.reaction_reactant_compound module ncsw_data.storage.cacs.sqlite_db.model.workbench.reaction_reactant_compound_pattern module ncsw_data.storage.cacs.sqlite_db.model.workbench.reaction_spectator_compound module ncsw_data.storage.cacs.sqlite_db.model.workbench.reaction_spectator_compound_pattern module ncsw_data.storage.cacs.sqlite_db.model.workbench.reaction_transformation_pattern module ncsw_data.storage.cacs.sqlite_db.sqlite_db module ncsw_data.storage.cacs.sqlite_db.typing module ncsw_data.storage.cacs.sqlite_db.utility module ncsw_data.storage.cacs.sqlite_db.utility.insert_ module ncsw_data.storage.cacs.sqlite_db.utility.select_ module ncsw_data.storage.cacs.sqlite_db.utility.typing module

O

OpenReactionDatabase (class in ncsw_data.source.reaction.ord) (class in ncsw_data.source.reaction.ord.ord) OpenReactionDatabaseDownloadUtility (class in ncsw_data.source.reaction.ord.utility) (class in ncsw_data.source.reaction.ord.utility.download)

OpenReactionDatabaseExtractionUtility (class in ncsw_data.source.reaction.ord.utility) (class in ncsw_data.source.reaction.ord.utility.extraction) OpenReactionDatabaseFormattingUtility (class in ncsw_data.source.reaction.ord.utility) (class in ncsw_data.source.reaction.ord.utility.formatting)

R

RDKitCompoundPatternDataset (class in ncsw_data.source.compound_pattern.rdkit) (class in ncsw_data.source.compound_pattern.rdkit.rdkit) RDKitCompoundPatternDatasetDownloadUtility (class in ncsw_data.source.compound_pattern.rdkit.utility) (class in ncsw_data.source.compound_pattern.rdkit.utility.download) RDKitCompoundPatternDatasetExtractionUtility (class in ncsw_data.source.compound_pattern.rdkit.utility) (class in ncsw_data.source.compound_pattern.rdkit.utility.extraction) RDKitCompoundPatternDatasetFormattingUtility (class in ncsw_data.source.compound_pattern.rdkit.utility) (class in ncsw_data.source.compound_pattern.rdkit.utility.formatting) ReactionDataSource (class in ncsw_data.source.reaction) (class in ncsw_data.source.reaction.reaction) ReactionPatternDataSource (class in ncsw_data.source.reaction_pattern) (class in ncsw_data.source.reaction_pattern.reaction_pattern) RetroRulesReactionPatternDatabase (class in ncsw_data.source.reaction_pattern.retro_rules) (class in ncsw_data.source.reaction_pattern.retro_rules.retro_rules)

RetroRulesReactionPatternDatabaseDownloadUtility (class in ncsw_data.source.reaction_pattern.retro_rules.utility) (class in ncsw_data.source.reaction_pattern.retro_rules.utility.download) RetroRulesReactionPatternDatabaseExtractionUtility (class in ncsw_data.source.reaction_pattern.retro_rules.utility) (class in ncsw_data.source.reaction_pattern.retro_rules.utility.extraction) RetroRulesReactionPatternDatabaseFormattingUtility (class in ncsw_data.source.reaction_pattern.retro_rules.utility) (class in ncsw_data.source.reaction_pattern.retro_rules.utility.formatting) RheaReactionDatabase (class in ncsw_data.source.reaction.rhea) (class in ncsw_data.source.reaction.rhea.rhea) RheaReactionDatabaseDownloadUtility (class in ncsw_data.source.reaction.rhea.utility) (class in ncsw_data.source.reaction.rhea.utility.download) RheaReactionDatabaseExtractionUtility (class in ncsw_data.source.reaction.rhea.utility) (class in ncsw_data.source.reaction.rhea.utility.extraction) RheaReactionDatabaseFormattingUtility (class in ncsw_data.source.reaction.rhea.utility) (class in ncsw_data.source.reaction.rhea.utility.formatting)

S

select_archive_compound_patterns() (ncsw_data.storage.cacs.sqlite_db.CaCSSQLiteDatabase method) (ncsw_data.storage.cacs.sqlite_db.sqlite_db.CaCSSQLiteDatabase method) select_archive_compound_patterns_from_sources() (ncsw_data.storage.cacs.sqlite_db.CaCSSQLiteDatabase method) (ncsw_data.storage.cacs.sqlite_db.sqlite_db.CaCSSQLiteDatabase method) select_archive_compounds() (ncsw_data.storage.cacs.sqlite_db.CaCSSQLiteDatabase method) (ncsw_data.storage.cacs.sqlite_db.sqlite_db.CaCSSQLiteDatabase method) select_archive_compounds_from_sources() (ncsw_data.storage.cacs.sqlite_db.CaCSSQLiteDatabase method) (ncsw_data.storage.cacs.sqlite_db.sqlite_db.CaCSSQLiteDatabase method) select_archive_reaction_patterns() (ncsw_data.storage.cacs.sqlite_db.CaCSSQLiteDatabase method) (ncsw_data.storage.cacs.sqlite_db.sqlite_db.CaCSSQLiteDatabase method) select_archive_reaction_patterns_from_sources() (ncsw_data.storage.cacs.sqlite_db.CaCSSQLiteDatabase method) (ncsw_data.storage.cacs.sqlite_db.sqlite_db.CaCSSQLiteDatabase method) select_archive_reactions() (ncsw_data.storage.cacs.sqlite_db.CaCSSQLiteDatabase method) (ncsw_data.storage.cacs.sqlite_db.sqlite_db.CaCSSQLiteDatabase method) select_archive_reactions_from_sources() (ncsw_data.storage.cacs.sqlite_db.CaCSSQLiteDatabase method) (ncsw_data.storage.cacs.sqlite_db.sqlite_db.CaCSSQLiteDatabase method) select_reversed_synthesis_routes() (ncsw_data.storage.cacs.sqlite_db.CaCSSQLiteDatabase method) (ncsw_data.storage.cacs.sqlite_db.sqlite_db.CaCSSQLiteDatabase method) select_workbench_compound_patterns() (ncsw_data.storage.cacs.sqlite_db.CaCSSQLiteDatabase method) (ncsw_data.storage.cacs.sqlite_db.sqlite_db.CaCSSQLiteDatabase method) select_workbench_compound_patterns_from_sources() (ncsw_data.storage.cacs.sqlite_db.CaCSSQLiteDatabase method) (ncsw_data.storage.cacs.sqlite_db.sqlite_db.CaCSSQLiteDatabase method) select_workbench_compounds() (ncsw_data.storage.cacs.sqlite_db.CaCSSQLiteDatabase method) (ncsw_data.storage.cacs.sqlite_db.sqlite_db.CaCSSQLiteDatabase method) select_workbench_compounds_from_sources() (ncsw_data.storage.cacs.sqlite_db.CaCSSQLiteDatabase method) (ncsw_data.storage.cacs.sqlite_db.sqlite_db.CaCSSQLiteDatabase method) select_workbench_reaction_patterns() (ncsw_data.storage.cacs.sqlite_db.CaCSSQLiteDatabase method) (ncsw_data.storage.cacs.sqlite_db.sqlite_db.CaCSSQLiteDatabase method) select_workbench_reaction_patterns_from_sources() (ncsw_data.storage.cacs.sqlite_db.CaCSSQLiteDatabase method) (ncsw_data.storage.cacs.sqlite_db.sqlite_db.CaCSSQLiteDatabase method)

select_workbench_reactions() (ncsw_data.storage.cacs.sqlite_db.CaCSSQLiteDatabase method) (ncsw_data.storage.cacs.sqlite_db.sqlite_db.CaCSSQLiteDatabase method) select_workbench_reactions_from_sources() (ncsw_data.storage.cacs.sqlite_db.CaCSSQLiteDatabase method) (ncsw_data.storage.cacs.sqlite_db.sqlite_db.CaCSSQLiteDatabase method) send_http_get_request() (ncsw_data.source.base.utility.DataSourceDownloadUtility static method) (ncsw_data.source.base.utility.download.DataSourceDownloadUtility static method) smarts (ncsw_data.storage.cacs.sqlite_db.model.archive.CaCSSQLiteDatabaseModelArchiveCompoundPattern attribute) (ncsw_data.storage.cacs.sqlite_db.model.archive.CaCSSQLiteDatabaseModelArchiveReactionPattern attribute) (ncsw_data.storage.cacs.sqlite_db.model.archive.compound_pattern.CaCSSQLiteDatabaseModelArchiveCompoundPattern attribute) (ncsw_data.storage.cacs.sqlite_db.model.archive.reaction_pattern.CaCSSQLiteDatabaseModelArchiveReactionPattern attribute) (ncsw_data.storage.cacs.sqlite_db.model.workbench.CaCSSQLiteDatabaseModelWorkbenchCompoundPattern attribute) (ncsw_data.storage.cacs.sqlite_db.model.workbench.CaCSSQLiteDatabaseModelWorkbenchReactionPattern attribute) (ncsw_data.storage.cacs.sqlite_db.model.workbench.compound_pattern.CaCSSQLiteDatabaseModelWorkbenchCompoundPattern attribute) (ncsw_data.storage.cacs.sqlite_db.model.workbench.reaction_pattern.CaCSSQLiteDatabaseModelWorkbenchReactionPattern attribute) smiles (ncsw_data.storage.cacs.sqlite_db.model.archive.CaCSSQLiteDatabaseModelArchiveCompound attribute) (ncsw_data.storage.cacs.sqlite_db.model.archive.CaCSSQLiteDatabaseModelArchiveReaction attribute) (ncsw_data.storage.cacs.sqlite_db.model.archive.compound.CaCSSQLiteDatabaseModelArchiveCompound attribute) (ncsw_data.storage.cacs.sqlite_db.model.archive.reaction.CaCSSQLiteDatabaseModelArchiveReaction attribute) (ncsw_data.storage.cacs.sqlite_db.model.workbench.CaCSSQLiteDatabaseModelWorkbenchCompound attribute) (ncsw_data.storage.cacs.sqlite_db.model.workbench.CaCSSQLiteDatabaseModelWorkbenchReaction attribute) (ncsw_data.storage.cacs.sqlite_db.model.workbench.compound.CaCSSQLiteDatabaseModelWorkbenchCompound attribute) (ncsw_data.storage.cacs.sqlite_db.model.workbench.reaction.CaCSSQLiteDatabaseModelWorkbenchReaction attribute) supported_data_sources (ncsw_data.source.compound.compound.CompoundDataSource attribute) (ncsw_data.source.compound.CompoundDataSource attribute) (ncsw_data.source.compound_pattern.compound_pattern.CompoundPatternDataSource attribute) (ncsw_data.source.compound_pattern.CompoundPatternDataSource attribute) (ncsw_data.source.reaction.reaction.ReactionDataSource attribute) (ncsw_data.source.reaction.ReactionDataSource attribute) (ncsw_data.source.reaction_pattern.reaction_pattern.ReactionPatternDataSource attribute) (ncsw_data.source.reaction_pattern.ReactionPatternDataSource attribute)

U

updated_at (ncsw_data.storage.cacs.sqlite_db.model.base.CaCSSQLiteDatabaseModelTimestampColumnsMixin attribute) (ncsw_data.storage.cacs.sqlite_db.model.base.mixin.CaCSSQLiteDatabaseModelTimestampColumnsMixin attribute) updated_by (ncsw_data.storage.cacs.sqlite_db.model.base.CaCSSQLiteDatabaseModelTimestampColumnsMixin attribute) (ncsw_data.storage.cacs.sqlite_db.model.base.mixin.CaCSSQLiteDatabaseModelTimestampColumnsMixin attribute) USPTOReactionDataset (class in ncsw_data.source.reaction.uspto) (class in ncsw_data.source.reaction.uspto.uspto)

USPTOReactionDatasetDownloadUtility (class in ncsw_data.source.reaction.uspto.utility) (class in ncsw_data.source.reaction.uspto.utility.download) USPTOReactionDatasetExtractionUtility (class in ncsw_data.source.reaction.uspto.utility) (class in ncsw_data.source.reaction.uspto.utility.extraction) USPTOReactionDatasetFormattingUtility (class in ncsw_data.source.reaction.uspto.utility) (class in ncsw_data.source.reaction.uspto.utility.formatting)

V

version (ncsw_data.storage.cacs.sqlite_db.model.archive.CaCSSQLiteDatabaseModelArchiveSource attribute) (ncsw_data.storage.cacs.sqlite_db.model.archive.source.CaCSSQLiteDatabaseModelArchiveSource attribute)

W

workbench_compound_id (ncsw_data.storage.cacs.sqlite_db.model.workbench.CaCSSQLiteDatabaseModelWorkbenchCompoundArchive attribute) (ncsw_data.storage.cacs.sqlite_db.model.workbench.CaCSSQLiteDatabaseModelWorkbenchReactionProductCompound attribute) (ncsw_data.storage.cacs.sqlite_db.model.workbench.CaCSSQLiteDatabaseModelWorkbenchReactionReactantCompound attribute) (ncsw_data.storage.cacs.sqlite_db.model.workbench.CaCSSQLiteDatabaseModelWorkbenchReactionSpectatorCompound attribute) (ncsw_data.storage.cacs.sqlite_db.model.workbench.compound_archive.CaCSSQLiteDatabaseModelWorkbenchCompoundArchive attribute) (ncsw_data.storage.cacs.sqlite_db.model.workbench.reaction_product_compound.CaCSSQLiteDatabaseModelWorkbenchReactionProductCompound attribute) (ncsw_data.storage.cacs.sqlite_db.model.workbench.reaction_reactant_compound.CaCSSQLiteDatabaseModelWorkbenchReactionReactantCompound attribute) (ncsw_data.storage.cacs.sqlite_db.model.workbench.reaction_spectator_compound.CaCSSQLiteDatabaseModelWorkbenchReactionSpectatorCompound attribute) workbench_compound_pattern_id (ncsw_data.storage.cacs.sqlite_db.model.workbench.CaCSSQLiteDatabaseModelWorkbenchCompoundPatternArchive attribute) (ncsw_data.storage.cacs.sqlite_db.model.workbench.CaCSSQLiteDatabaseModelWorkbenchReactionProductCompoundPattern attribute) (ncsw_data.storage.cacs.sqlite_db.model.workbench.CaCSSQLiteDatabaseModelWorkbenchReactionReactantCompoundPattern attribute) (ncsw_data.storage.cacs.sqlite_db.model.workbench.CaCSSQLiteDatabaseModelWorkbenchReactionSpectatorCompoundPattern attribute) (ncsw_data.storage.cacs.sqlite_db.model.workbench.compound_pattern_archive.CaCSSQLiteDatabaseModelWorkbenchCompoundPatternArchive attribute) (ncsw_data.storage.cacs.sqlite_db.model.workbench.reaction_product_compound_pattern.CaCSSQLiteDatabaseModelWorkbenchReactionProductCompoundPattern attribute) (ncsw_data.storage.cacs.sqlite_db.model.workbench.reaction_reactant_compound_pattern.CaCSSQLiteDatabaseModelWorkbenchReactionReactantCompoundPattern attribute) (ncsw_data.storage.cacs.sqlite_db.model.workbench.reaction_spectator_compound_pattern.CaCSSQLiteDatabaseModelWorkbenchReactionSpectatorCompoundPattern attribute) workbench_compound_patterns (ncsw_data.storage.cacs.sqlite_db.model.archive.CaCSSQLiteDatabaseModelArchiveCompoundPattern attribute) (ncsw_data.storage.cacs.sqlite_db.model.archive.compound_pattern.CaCSSQLiteDatabaseModelArchiveCompoundPattern attribute) workbench_compounds (ncsw_data.storage.cacs.sqlite_db.model.archive.CaCSSQLiteDatabaseModelArchiveCompound attribute) (ncsw_data.storage.cacs.sqlite_db.model.archive.compound.CaCSSQLiteDatabaseModelArchiveCompound attribute) workbench_product_compound_patterns (ncsw_data.storage.cacs.sqlite_db.model.workbench.CaCSSQLiteDatabaseModelWorkbenchReactionPattern attribute) (ncsw_data.storage.cacs.sqlite_db.model.workbench.reaction_pattern.CaCSSQLiteDatabaseModelWorkbenchReactionPattern attribute) workbench_product_compounds (ncsw_data.storage.cacs.sqlite_db.model.workbench.CaCSSQLiteDatabaseModelWorkbenchReaction attribute) (ncsw_data.storage.cacs.sqlite_db.model.workbench.reaction.CaCSSQLiteDatabaseModelWorkbenchReaction attribute) workbench_reactant_compound_patterns (ncsw_data.storage.cacs.sqlite_db.model.workbench.CaCSSQLiteDatabaseModelWorkbenchReactionPattern attribute) (ncsw_data.storage.cacs.sqlite_db.model.workbench.reaction_pattern.CaCSSQLiteDatabaseModelWorkbenchReactionPattern attribute) workbench_reactant_compounds (ncsw_data.storage.cacs.sqlite_db.model.workbench.CaCSSQLiteDatabaseModelWorkbenchReaction attribute) (ncsw_data.storage.cacs.sqlite_db.model.workbench.reaction.CaCSSQLiteDatabaseModelWorkbenchReaction attribute) workbench_reaction_id (ncsw_data.storage.cacs.sqlite_db.model.workbench.CaCSSQLiteDatabaseModelWorkbenchReactionArchive attribute) (ncsw_data.storage.cacs.sqlite_db.model.workbench.CaCSSQLiteDatabaseModelWorkbenchReactionProductCompound attribute) (ncsw_data.storage.cacs.sqlite_db.model.workbench.CaCSSQLiteDatabaseModelWorkbenchReactionReactantCompound attribute) (ncsw_data.storage.cacs.sqlite_db.model.workbench.CaCSSQLiteDatabaseModelWorkbenchReactionSpectatorCompound attribute) (ncsw_data.storage.cacs.sqlite_db.model.workbench.CaCSSQLiteDatabaseModelWorkbenchReactionTransformationPattern attribute) (ncsw_data.storage.cacs.sqlite_db.model.workbench.reaction_archive.CaCSSQLiteDatabaseModelWorkbenchReactionArchive attribute) (ncsw_data.storage.cacs.sqlite_db.model.workbench.reaction_product_compound.CaCSSQLiteDatabaseModelWorkbenchReactionProductCompound attribute) (ncsw_data.storage.cacs.sqlite_db.model.workbench.reaction_reactant_compound.CaCSSQLiteDatabaseModelWorkbenchReactionReactantCompound attribute) (ncsw_data.storage.cacs.sqlite_db.model.workbench.reaction_spectator_compound.CaCSSQLiteDatabaseModelWorkbenchReactionSpectatorCompound attribute) (ncsw_data.storage.cacs.sqlite_db.model.workbench.reaction_transformation_pattern.CaCSSQLiteDatabaseModelWorkbenchReactionTransformationPattern attribute)

workbench_reaction_pattern_id (ncsw_data.storage.cacs.sqlite_db.model.workbench.CaCSSQLiteDatabaseModelWorkbenchReactionPatternArchive attribute) (ncsw_data.storage.cacs.sqlite_db.model.workbench.CaCSSQLiteDatabaseModelWorkbenchReactionProductCompoundPattern attribute) (ncsw_data.storage.cacs.sqlite_db.model.workbench.CaCSSQLiteDatabaseModelWorkbenchReactionReactantCompoundPattern attribute) (ncsw_data.storage.cacs.sqlite_db.model.workbench.CaCSSQLiteDatabaseModelWorkbenchReactionSpectatorCompoundPattern attribute) (ncsw_data.storage.cacs.sqlite_db.model.workbench.CaCSSQLiteDatabaseModelWorkbenchReactionTransformationPattern attribute) (ncsw_data.storage.cacs.sqlite_db.model.workbench.reaction_pattern_archive.CaCSSQLiteDatabaseModelWorkbenchReactionPatternArchive attribute) (ncsw_data.storage.cacs.sqlite_db.model.workbench.reaction_product_compound_pattern.CaCSSQLiteDatabaseModelWorkbenchReactionProductCompoundPattern attribute) (ncsw_data.storage.cacs.sqlite_db.model.workbench.reaction_reactant_compound_pattern.CaCSSQLiteDatabaseModelWorkbenchReactionReactantCompoundPattern attribute) (ncsw_data.storage.cacs.sqlite_db.model.workbench.reaction_spectator_compound_pattern.CaCSSQLiteDatabaseModelWorkbenchReactionSpectatorCompoundPattern attribute) (ncsw_data.storage.cacs.sqlite_db.model.workbench.reaction_transformation_pattern.CaCSSQLiteDatabaseModelWorkbenchReactionTransformationPattern attribute) workbench_reaction_patterns (ncsw_data.storage.cacs.sqlite_db.model.archive.CaCSSQLiteDatabaseModelArchiveReactionPattern attribute) (ncsw_data.storage.cacs.sqlite_db.model.archive.reaction_pattern.CaCSSQLiteDatabaseModelArchiveReactionPattern attribute) (ncsw_data.storage.cacs.sqlite_db.model.workbench.CaCSSQLiteDatabaseModelWorkbenchReaction attribute) (ncsw_data.storage.cacs.sqlite_db.model.workbench.reaction.CaCSSQLiteDatabaseModelWorkbenchReaction attribute) workbench_reaction_patterns_as_product (ncsw_data.storage.cacs.sqlite_db.model.workbench.CaCSSQLiteDatabaseModelWorkbenchCompoundPattern attribute) (ncsw_data.storage.cacs.sqlite_db.model.workbench.compound_pattern.CaCSSQLiteDatabaseModelWorkbenchCompoundPattern attribute) workbench_reaction_patterns_as_reactant (ncsw_data.storage.cacs.sqlite_db.model.workbench.CaCSSQLiteDatabaseModelWorkbenchCompoundPattern attribute) (ncsw_data.storage.cacs.sqlite_db.model.workbench.compound_pattern.CaCSSQLiteDatabaseModelWorkbenchCompoundPattern attribute) workbench_reaction_patterns_as_spectator (ncsw_data.storage.cacs.sqlite_db.model.workbench.CaCSSQLiteDatabaseModelWorkbenchCompoundPattern attribute) (ncsw_data.storage.cacs.sqlite_db.model.workbench.compound_pattern.CaCSSQLiteDatabaseModelWorkbenchCompoundPattern attribute) workbench_reactions (ncsw_data.storage.cacs.sqlite_db.model.archive.CaCSSQLiteDatabaseModelArchiveReaction attribute) (ncsw_data.storage.cacs.sqlite_db.model.archive.reaction.CaCSSQLiteDatabaseModelArchiveReaction attribute) (ncsw_data.storage.cacs.sqlite_db.model.workbench.CaCSSQLiteDatabaseModelWorkbenchReactionPattern attribute) (ncsw_data.storage.cacs.sqlite_db.model.workbench.reaction_pattern.CaCSSQLiteDatabaseModelWorkbenchReactionPattern attribute) workbench_reactions_as_product (ncsw_data.storage.cacs.sqlite_db.model.workbench.CaCSSQLiteDatabaseModelWorkbenchCompound attribute) (ncsw_data.storage.cacs.sqlite_db.model.workbench.compound.CaCSSQLiteDatabaseModelWorkbenchCompound attribute) workbench_reactions_as_reactant (ncsw_data.storage.cacs.sqlite_db.model.workbench.CaCSSQLiteDatabaseModelWorkbenchCompound attribute) (ncsw_data.storage.cacs.sqlite_db.model.workbench.compound.CaCSSQLiteDatabaseModelWorkbenchCompound attribute) workbench_reactions_as_spectator (ncsw_data.storage.cacs.sqlite_db.model.workbench.CaCSSQLiteDatabaseModelWorkbenchCompound attribute) (ncsw_data.storage.cacs.sqlite_db.model.workbench.compound.CaCSSQLiteDatabaseModelWorkbenchCompound attribute) workbench_spectator_compound_patterns (ncsw_data.storage.cacs.sqlite_db.model.workbench.CaCSSQLiteDatabaseModelWorkbenchReactionPattern attribute) (ncsw_data.storage.cacs.sqlite_db.model.workbench.reaction_pattern.CaCSSQLiteDatabaseModelWorkbenchReactionPattern attribute) workbench_spectator_compounds (ncsw_data.storage.cacs.sqlite_db.model.workbench.CaCSSQLiteDatabaseModelWorkbenchReaction attribute) (ncsw_data.storage.cacs.sqlite_db.model.workbench.reaction.CaCSSQLiteDatabaseModelWorkbenchReaction attribute)

Z

ZINCCompoundDatabase (class in ncsw_data.source.compound.zinc) (class in ncsw_data.source.compound.zinc.zinc) ZINCCompoundDatabaseDownloadUtility (class in ncsw_data.source.compound.zinc.utility) (class in ncsw_data.source.compound.zinc.utility.download)

ZINCCompoundDatabaseExtractionUtility (class in ncsw_data.source.compound.zinc.utility) (class in ncsw_data.source.compound.zinc.utility.extraction) ZINCCompoundDatabaseFormattingUtility (class in ncsw_data.source.compound.zinc.utility) (class in ncsw_data.source.compound.zinc.utility.formatting)